Detailed information NTG1074599

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ACJED3_RS13830
• Genome accession: NZ_CP174155
• Coordinates: 2602421..2603566 (-)
• Length: 381 a.a.
• NCBI ID: WP_014481226.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain G01
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2597421..2608566

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJED3_RS13805	pbpG	2597688..2599763 (-)	2076	WP_014481227.1	transglycosylase domain-containing protein	-
ACJED3_RS13810	speE	2599965..2600795 (+)	831	WP_003227543.1	spermidine synthase	-
ACJED3_RS13815	speB	2600856..2601728 (+)	873	WP_003227545.1	agmatinase	-
ACJED3_RS13820	-	2601793..2602220 (-)	428	Protein_2672	YbaK/EbsC family protein	-
ACJED3_RS13825	phrF	2602318..2602437 (-)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
ACJED3_RS13830	rapF	2602421..2603566 (-)	1146	WP_014481226.1	response regulator aspartate phosphatase RapF	Regulator
ACJED3_RS13835	-	2603569..2603799 (+)	231	Protein_2675	hypothetical protein	-
ACJED3_RS13840	ywhK	2603796..2605151 (+)	1356	WP_014481224.1	YncE family protein	-
ACJED3_RS13845	ywhL	2605190..2606566 (+)	1377	WP_014481223.1	YncE family protein	-
ACJED3_RS13850	albG	2606572..2607273 (-)	702	WP_014481222.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
ACJED3_RS13855	albF	2607270..2608550 (-)	1281	WP_014481221.1	pitrilysin family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45627.12 Da
• Isoelectric Point: 5.1503

>NTDB_id=1074599 ACJED3_RS13830 WP_014481226.1 2602421..2603566(-) (rapF) [Bacillus subtilis strain G01]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=1074599 ACJED3_RS13830 WP_014481226.1 2602421..2603566(-) (rapF) [Bacillus subtilis strain G01]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.738	100	0.997
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572