Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACAM22_RS07990 Genome accession   NZ_AP028929
Coordinates   1749709..1750440 (-) Length   243 a.a.
NCBI ID   WP_369606658.1    Uniprot ID   A0AAT9G2N0
Organism   Streptococcus sp. SN-1     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1744709..1755440
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACAM22_RS07965 (MASAN616_15460) - 1745455..1746795 (-) 1341 WP_369606656.1 sensor histidine kinase -
  ACAM22_RS07970 (MASAN616_15470) comE/blpR 1746809..1747546 (-) 738 WP_261029340.1 response regulator transcription factor Regulator
  ACAM22_RS07975 (MASAN616_15480) - 1747551..1747889 (-) 339 WP_153199232.1 LytTR family DNA-binding domain-containing protein -
  ACAM22_RS07980 (MASAN616_15490) - 1748272..1748601 (+) 330 WP_084861873.1 helicase BlpT -
  ACAM22_RS07985 (MASAN616_15500) pptB 1748663..1749712 (-) 1050 WP_369606657.1 ABC transporter permease Regulator
  ACAM22_RS07990 (MASAN616_15510) pptA 1749709..1750440 (-) 732 WP_369606658.1 ABC transporter ATP-binding protein Regulator
  ACAM22_RS07995 (MASAN616_15520) - 1750508..1750918 (+) 411 WP_001278317.1 HIT family protein -
  ACAM22_RS08000 (MASAN616_15530) - 1750928..1751215 (+) 288 WP_084928138.1 hypothetical protein -
  ACAM22_RS08005 (MASAN616_15540) dnaJ 1751656..1752765 (-) 1110 WP_369606659.1 molecular chaperone DnaJ -
  ACAM22_RS08010 (MASAN616_15550) - 1752964..1753596 (-) 633 WP_369606660.1 DJ-1/PfpI family protein -
  ACAM22_RS08015 (MASAN616_15560) - 1753676..1754077 (-) 402 WP_000114425.1 hypothetical protein -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27096.61 Da        Isoelectric Point: 4.8698

>NTDB_id=107344 ACAM22_RS07990 WP_369606658.1 1749709..1750440(-) (pptA) [Streptococcus sp. SN-1]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLTPYSGSININGLTLQEDVTNYRKQIGYIP
ETPSLYEELTLREHIETVAMAYGIEQKVAFERVEPLLKMFRLDQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAISDLIQLLEVEKQKGKSILMSTHVLDSAEKMCDAFVILHKGEVRAKGNLLQLREAFNMPEASLNDIYLALTKE
GDL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=107344 ACAM22_RS07990 WP_369606658.1 1749709..1750440(-) (pptA) [Streptococcus sp. SN-1]
ATGTTAGAAATTAAAAACCTGACAGGTGGCTATGTCCATGTCCCTGTCTTGAAAGATGTGTCCTTTACTGTTGAAAGTGG
GCAGTTGGTCGGTTTGATTGGTCTCAACGGTGCTGGGAAATCAACGACAATCAATGAGATTATTGGTCTGTTGACGCCTT
ATAGTGGTTCCATCAATATCAATGGCTTGACCCTGCAAGAAGATGTAACGAACTATCGCAAGCAAATTGGCTACATTCCT
GAGACGCCTAGTCTGTATGAGGAATTGACCCTCAGAGAGCATATCGAAACGGTTGCCATGGCTTATGGTATTGAGCAAAA
AGTGGCTTTTGAGCGAGTGGAACCTTTGTTAAAAATGTTCCGTCTGGACCAGAAATTGGACTGGTTCCCTGTTCATTTTT
CAAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCTTTTGTGGTGGATCCGAGTCTCTTTATCGTGGATGAGCCTTTC
CTTGGTCTTGATCCGCTGGCTATTTCTGACTTGATTCAGCTTTTGGAAGTGGAAAAGCAAAAGGGCAAGTCCATTCTCAT
GAGTACCCACGTGCTGGACTCTGCGGAGAAGATGTGTGATGCCTTTGTCATTCTTCACAAGGGAGAGGTGCGTGCCAAGG
GGAATCTCCTGCAACTGCGTGAAGCCTTTAATATGCCTGAGGCTAGTTTGAATGATATTTACTTGGCTCTGACCAAAGAG
GGGGACCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

98.354

0.716
  pptA Streptococcus thermophilus LMD-9

71.967

98.354

0.708

Multiple sequence alignment