Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   ACAM22_RS07985 Genome accession   NZ_AP028929
Coordinates   1748663..1749712 (-) Length   349 a.a.
NCBI ID   WP_369606657.1    Uniprot ID   A0AAT9G2I5
Organism   Streptococcus sp. SN-1     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1743663..1754712
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACAM22_RS07955 - 1744000..1744119 (-) 120 WP_142760972.1 PncF family bacteriocin immunity protein -
  ACAM22_RS07960 - 1744411..1744767 (-) 357 WP_078237973.1 hypothetical protein -
  ACAM22_RS07965 (MASAN616_15460) - 1745455..1746795 (-) 1341 WP_369606656.1 sensor histidine kinase -
  ACAM22_RS07970 (MASAN616_15470) comE/blpR 1746809..1747546 (-) 738 WP_261029340.1 response regulator transcription factor Regulator
  ACAM22_RS07975 (MASAN616_15480) - 1747551..1747889 (-) 339 WP_153199232.1 LytTR family DNA-binding domain-containing protein -
  ACAM22_RS07980 (MASAN616_15490) - 1748272..1748601 (+) 330 WP_084861873.1 helicase BlpT -
  ACAM22_RS07985 (MASAN616_15500) pptB 1748663..1749712 (-) 1050 WP_369606657.1 ABC transporter permease Regulator
  ACAM22_RS07990 (MASAN616_15510) pptA 1749709..1750440 (-) 732 WP_369606658.1 ABC transporter ATP-binding protein Regulator
  ACAM22_RS07995 (MASAN616_15520) - 1750508..1750918 (+) 411 WP_001278317.1 HIT family protein -
  ACAM22_RS08000 (MASAN616_15530) - 1750928..1751215 (+) 288 WP_084928138.1 hypothetical protein -
  ACAM22_RS08005 (MASAN616_15540) dnaJ 1751656..1752765 (-) 1110 WP_369606659.1 molecular chaperone DnaJ -
  ACAM22_RS08010 (MASAN616_15550) - 1752964..1753596 (-) 633 WP_369606660.1 DJ-1/PfpI family protein -
  ACAM22_RS08015 (MASAN616_15560) - 1753676..1754077 (-) 402 WP_000114425.1 hypothetical protein -

Sequence


Protein


Download         Length: 349 a.a.        Molecular weight: 40553.57 Da        Isoelectric Point: 10.1270

>NTDB_id=107343 ACAM22_RS07985 WP_369606657.1 1748663..1749712(-) (pptB) [Streptococcus sp. SN-1]
MKDLFLRRKQAFRKECVGYLRYVLNDHFVLFLLVLLGFLAYQYSQLLQHFPENHWSILLFVGITSVLLFLWGGIATYMEA
PDKLFLLVGEEEIKLHLKRQTGISLVFWLFVQTLFLLLFAPLFLAMGYGLPVFLVYVLLLGVGKYFLFRQKASKFFTETG
LDWDYVISQESKRKQVLLRFFALFTQVKGISNSVKRRAYLDFILKAVQKVPGKIWQNLYLRSYLRNGDLFALSLRLLLLS
LLAQVFIEQSWIATAVVVLFNYLLLFQLLALYHAFDYQYLTQLFPLDKGQKEKGLQTVVRGLTSLVLVVELVVGLITFQE
KRALLALLGAGLVLLVLYLPYQVKRQMQD

Nucleotide


Download         Length: 1050 bp        

>NTDB_id=107343 ACAM22_RS07985 WP_369606657.1 1748663..1749712(-) (pptB) [Streptococcus sp. SN-1]
ATGAAAGACTTGTTTTTAAGGAGAAAGCAGGCTTTTCGTAAGGAGTGTGTCGGTTATCTGCGTTATGTTCTCAATGACCA
CTTTGTCTTATTCCTGCTTGTCTTGTTGGGCTTTCTAGCCTACCAATACAGTCAACTCTTGCAACATTTTCCTGAAAATC
ATTGGTCTATCCTTTTGTTTGTAGGAATCACCTCTGTTTTACTTTTTCTCTGGGGTGGAATTGCCACCTATATGGAGGCT
CCAGACAAGCTCTTTCTCTTAGTCGGAGAAGAGGAAATCAAACTCCATCTTAAGCGTCAAACTGGCATTTCCCTAGTCTT
TTGGCTCTTTGTCCAGACTCTTTTCTTGCTGTTATTTGCGCCCTTATTTTTAGCAATGGGCTATGGCTTGCCTGTTTTTC
TGGTCTATGTGCTTTTATTGGGAGTAGGTAAATATTTCCTCTTTCGTCAAAAGGCTAGTAAATTTTTCACGGAAACTGGA
CTGGATTGGGACTATGTCATTTCCCAAGAAAGCAAGCGTAAGCAAGTCTTGCTTCGTTTCTTTGCTCTCTTTACGCAGGT
CAAGGGAATTTCAAACAGCGTCAAACGTCGTGCCTATCTGGACTTTATCCTAAAGGCTGTCCAGAAGGTGCCTGGAAAGA
TTTGGCAAAATCTCTATCTGCGTTCTTATCTGCGAAATGGAGATCTCTTTGCCCTCAGTCTCCGTCTGCTCTTACTTTCA
TTGCTGGCGCAGGTCTTTATCGAGCAATCTTGGATTGCGACAGCAGTGGTAGTGCTGTTTAACTACCTCTTGCTCTTTCA
GTTGCTGGCCCTCTATCACGCCTTTGACTACCAGTATTTGACTCAACTTTTTCCACTGGACAAGGGGCAAAAGGAAAAAG
GCTTACAGACTGTAGTCCGAGGATTGACCAGTTTGGTCTTAGTAGTGGAATTAGTTGTTGGGTTGATTACCTTCCAAGAA
AAACGAGCCCTTCTAGCCTTACTGGGAGCTGGTTTGGTTTTACTAGTCTTGTATTTGCCTTATCAGGTCAAACGTCAGAT
GCAGGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus salivarius strain HSISS4

48.286

100

0.484

  pptB Streptococcus thermophilus LMD-9

47.429

100

0.476


Multiple sequence alignment