Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   ACAM22_RS05830 Genome accession   NZ_AP028929
Coordinates   1301909..1303876 (-) Length   655 a.a.
NCBI ID   WP_077805000.1    Uniprot ID   -
Organism   Streptococcus sp. SN-1     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1296909..1308876
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACAM22_RS05795 (MASAN616_11410) - 1297546..1297740 (-) 195 WP_001081602.1 DUF3272 domain-containing protein -
  ACAM22_RS05800 (MASAN616_11420) dnaX 1297768..1299423 (-) 1656 WP_261050130.1 DNA polymerase III subunit gamma/tau -
  ACAM22_RS05805 (MASAN616_11430) - 1299423..1299920 (-) 498 WP_261043778.1 GAF domain-containing protein -
  ACAM22_RS05810 (MASAN616_11440) rpsA 1300006..1301208 (-) 1203 WP_261043780.1 30S ribosomal protein S1 -
  ACAM22_RS05825 (MASAN616_11450) - 1301581..1301811 (-) 231 WP_000037113.1 DUF2969 domain-containing protein -
  ACAM22_RS05830 (MASAN616_11460) amiA3 1301909..1303876 (-) 1968 WP_077805000.1 peptide ABC transporter substrate-binding protein Regulator
  ACAM22_RS05835 (MASAN616_11470) - 1303899..1304921 (-) 1023 WP_153226070.1 branched-chain amino acid aminotransferase -
  ACAM22_RS05840 - 1305230..1305478 (+) 249 Protein_1156 IS630 transposase-related protein -
  ACAM22_RS05845 - 1305681..1305815 (+) 135 Protein_1157 hypothetical protein -
  ACAM22_RS05850 (MASAN616_11480) - 1305838..1307004 (-) 1167 WP_369606501.1 acetyl-CoA carboxylase biotin carboxylase subunit family protein -
  ACAM22_RS05855 (MASAN616_11490) - 1307017..1307757 (-) 741 WP_000546817.1 esterase family protein -
  ACAM22_RS05860 (MASAN616_11500) - 1307778..1308602 (-) 825 WP_060805693.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 655 a.a.        Molecular weight: 72702.31 Da        Isoelectric Point: 5.1322

>NTDB_id=107332 ACAM22_RS05830 WP_077805000.1 1301909..1303876(-) (amiA3) [Streptococcus sp. SN-1]
MKSKKWLLTAGVVLSTTALLVACGKADKEADAPTTFSYVYAVDPASLDYSIATRTSTTDVIGNVVDGLMENDQYGNVIPS
LAEDWSVSKDGLTYTYKLRKGVKWYTSEGEEYAEVTAHDFVTGLKHVADGKSDGVSLIQNSIKGLDAYMTGETNDFSTVG
VKALDDYTVEYTLNKPESFWNSKVTTATMLPVNEEFLKASGKDYGAVTPAGILYNGPYILKTLTSKSLIEYEKNPNYWDK
EKVKIEKIKLTYYDGSDQESLIRSFSSGAYTTARLFPSSSNFASTLEQYGDKITYSPQDSSSYYFTFNVNRQSYNKTAKT
SEEQKTSTKEAMLNKDFRQAINFAFNRHSYAAQLNGEDGADKIIRNSLVPDNFVQAGGKNFGQIAQAELVNYGDQWKGVE
LVDGKDSIYNPDKAKAAFEKAKKDLESKGVSFPIHLDVPVEQTDTIAVQQSNSFKQSIESTLGAENVVIDVLQMTDNEKE
TITSQARVPSQKDYDLNSTGWAPSYQDPASYLNIMDPKSGSAMKHLGITKGKDKDVVAKLGLDQYKKLLDDADSETTNLE
ERYEKYAKAQAWLTDSSLLMPTASSGGSPVVSNVVPFSKPYSQVGIKGDPYIFKGMKLQKDIVTTKEYEEALKKWQKEKL
ESNGKYQKELEKHIK

Nucleotide


Download         Length: 1968 bp        

>NTDB_id=107332 ACAM22_RS05830 WP_077805000.1 1301909..1303876(-) (amiA3) [Streptococcus sp. SN-1]
ATGAAATCGAAAAAGTGGCTCTTAACAGCAGGAGTGGTCCTGAGCACAACAGCTCTTTTAGTGGCTTGTGGAAAAGCTGA
TAAAGAAGCAGATGCACCGACAACATTTTCATATGTCTATGCAGTAGATCCAGCATCTTTGGACTATAGTATAGCGACTC
GTACATCTACAACAGATGTCATCGGGAACGTGGTTGATGGCTTGATGGAAAACGACCAATACGGAAATGTTATTCCTTCC
TTGGCTGAGGATTGGTCTGTGTCAAAAGATGGTTTGACTTATACCTACAAACTTCGTAAAGGAGTTAAATGGTACACTTC
TGAAGGTGAAGAATATGCAGAAGTAACAGCCCATGACTTTGTAACAGGATTGAAACATGTAGCTGATGGTAAGTCAGACG
GTGTCTCGCTCATCCAAAATTCAATTAAGGGTTTGGATGCCTACATGACTGGTGAGACCAATGATTTCTCTACAGTTGGT
GTTAAGGCCTTGGACGATTATACAGTTGAATATACCTTAAACAAACCAGAAAGCTTCTGGAACTCTAAAGTCACAACAGC
GACGATGTTGCCTGTAAATGAAGAGTTTTTGAAGGCATCAGGTAAAGATTATGGAGCAGTTACTCCAGCAGGGATTCTTT
ACAATGGTCCTTATATCTTGAAGACCTTGACTTCTAAATCGTTAATCGAATACGAGAAAAATCCAAACTACTGGGATAAA
GAAAAGGTAAAAATAGAGAAAATCAAATTGACCTACTACGATGGTTCTGATCAGGAATCCTTGATTCGTAGCTTCTCTTC
AGGTGCCTATACGACAGCCCGTCTCTTCCCAAGTAGCTCAAACTTTGCTTCAACTTTGGAACAATACGGAGATAAAATCA
CCTATAGCCCACAGGATTCAAGTAGTTATTACTTCACCTTTAACGTAAATCGTCAGTCATATAATAAAACTGCGAAAACA
AGTGAAGAGCAAAAGACTTCTACAAAAGAAGCTATGCTTAATAAGGACTTCCGTCAGGCTATCAACTTTGCCTTCAACCG
CCATTCTTATGCTGCCCAGCTAAATGGTGAAGACGGTGCGGACAAGATTATTCGTAACAGCCTTGTTCCTGACAACTTTG
TACAAGCAGGGGGTAAAAACTTTGGTCAAATCGCTCAAGCTGAGTTGGTGAACTATGGTGACCAATGGAAAGGCGTTGAG
TTAGTGGATGGTAAGGATTCTATCTACAACCCTGACAAGGCTAAAGCAGCATTTGAAAAAGCTAAGAAAGACTTGGAATC
TAAAGGGGTAAGCTTCCCAATTCACTTGGATGTCCCAGTTGAACAAACAGATACCATCGCCGTTCAACAAAGCAACTCTT
TCAAACAGTCTATCGAATCAACTCTTGGTGCTGAAAATGTTGTCATTGATGTTCTTCAAATGACAGATAATGAAAAGGAA
ACAATCACTTCTCAAGCGCGTGTTCCTTCTCAAAAAGATTATGATTTGAACAGTACAGGATGGGCTCCAAGTTATCAAGA
CCCAGCATCTTACTTGAATATCATGGATCCTAAATCAGGTTCTGCCATGAAGCACCTCGGTATCACTAAAGGGAAAGATA
AGGATGTCGTAGCGAAACTTGGTTTGGACCAGTATAAGAAATTATTGGATGATGCCGATTCAGAAACTACAAATCTTGAA
GAGCGCTATGAAAAATATGCCAAGGCTCAAGCTTGGTTGACAGATAGTTCATTATTGATGCCAACAGCTTCATCTGGTGG
TTCTCCAGTTGTAAGTAATGTCGTGCCATTCTCAAAACCGTACTCACAAGTTGGTATTAAAGGTGACCCATATATCTTTA
AAGGAATGAAATTGCAAAAAGATATCGTTACGACAAAAGAATATGAAGAAGCACTGAAAAAATGGCAAAAAGAAAAATTG
GAATCAAATGGTAAGTACCAAAAAGAACTAGAAAAACACATTAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(77-518)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

52.879

100

0.533
  amiA Streptococcus salivarius strain HSISS4

52.432

100

0.527
  amiA3 Streptococcus thermophilus LMG 18311

52.273

100

0.527

Multiple sequence alignment