Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA   Type   Regulator
Locus tag   ACAM22_RS02785 Genome accession   NZ_AP028929
Coordinates   643728..645686 (+) Length   652 a.a.
NCBI ID   WP_173278119.1    Uniprot ID   -
Organism   Streptococcus sp. SN-1     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 638728..650686
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACAM22_RS02760 (MASAN616_05420) - 638922..639378 (+) 457 Protein_547 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase -
  ACAM22_RS02765 (MASAN616_05430) - 639362..640012 (+) 651 WP_369606926.1 DUF1803 domain-containing protein -
  ACAM22_RS02770 (MASAN616_05440) - 640113..640304 (+) 192 WP_173267004.1 CsbD family protein -
  ACAM22_RS02775 (MASAN616_05450) - 640350..641795 (-) 1446 WP_369606927.1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase -
  ACAM22_RS02780 (MASAN616_05460) - 641901..643523 (+) 1623 WP_261202824.1 polysaccharide biosynthesis protein -
  ACAM22_RS02785 (MASAN616_05470) amiA 643728..645686 (+) 1959 WP_173278119.1 peptide ABC transporter substrate-binding protein Regulator
  ACAM22_RS02790 (MASAN616_05480) - 645829..646923 (+) 1095 WP_369606928.1 cystathionine gamma-synthase -
  ACAM22_RS02795 (MASAN616_05490) - 646931..648097 (+) 1167 WP_369606929.1 MalY/PatB family protein -

Sequence

Protein


Download         Length: 652 a.a.        Molecular weight: 72760.19 Da        Isoelectric Point: 5.0694

>NTDB_id=107320 ACAM22_RS02785 WP_173278119.1 643728..645686(+) (amiA) [Streptococcus sp. SN-1]
MKKSKAKYATLAGVVLSAGILLSACGNSSTGSKTYNYVYASDPSSFNYLAENRATTNDIITNLVDGLMENDQYGNYVPSL
AEDWSVSKDGLTYTYKLRKEAKWYTSEGEEYAPVTAKDFVTGLQYAADKKSEALYLVQESVVGLDDYINGKTKDFSTVGV
KAIDDQTVQYTLTRPEPYWNSKTTSTILFPLNADFLKSKGDDFGKVDPSSILYNGPFLMKSFVSKSVIEFKKNPNYWDAK
NVFVDDVKLAYFDGSDQDALARNFVEGAYSYARLYPNSSSFEGIKEKNKDNIVYSLQDATSYFLNFNLDRKSYKFTAKTS
DAEKKSTQEAVLNKNFRQAINFAYDRTAYGAQSQGEDGATKILRNLVVPPNFVSINGKDFGEVVASKMVNYGKEWQGINF
ADAQDPYYNPEKAKAKFAEAKKELQAKGVQFPIHLDKSVDLTNKAEIQGINSMKQSIESVLGADNVVIDVHQLSTEDFDN
TSYLAQTAAQKDYDLYNGGWSADYQDPSSYLEIFNVKSGGVLQNLGLEPGEVNDKAKAVGLDTYTQMLEDANKEQDPAKR
YEKYAEAQAWLVDSSLAIPNVSLGGTPTLRKTVPFSSPFSLAGNKGVESYKYLKLQDKTVTKDEYEKAKEKWMKEKEESN
KKAQEELAKHVK

Nucleotide


Download         Length: 1959 bp        

>NTDB_id=107320 ACAM22_RS02785 WP_173278119.1 643728..645686(+) (amiA) [Streptococcus sp. SN-1]
ATGAAAAAGTCTAAGGCCAAGTATGCAACACTTGCAGGTGTCGTGTTAAGTGCAGGTATTTTGTTAAGTGCCTGTGGAAA
TTCTAGCACAGGGTCAAAAACATATAATTATGTCTATGCTAGTGATCCATCTAGTTTTAATTATTTAGCAGAAAATCGTG
CGACAACTAATGATATTATCACTAATCTAGTTGATGGTCTCATGGAAAATGATCAATATGGGAATTATGTTCCATCCTTG
GCAGAGGATTGGAGTGTTTCTAAGGACGGTTTGACTTATACCTACAAACTTCGTAAGGAAGCGAAATGGTATACCTCTGA
AGGTGAAGAATATGCCCCAGTAACTGCCAAAGACTTCGTAACTGGTCTTCAGTATGCTGCTGATAAAAAATCAGAAGCCT
TGTACCTAGTACAAGAATCCGTTGTAGGTTTGGATGACTACATTAACGGTAAAACGAAAGACTTTTCAACTGTAGGTGTA
AAGGCTATTGACGACCAAACGGTTCAATATACTTTGACTCGCCCAGAACCTTACTGGAATTCAAAAACAACTTCAACAAT
TCTCTTTCCTCTTAATGCGGATTTCTTGAAATCTAAAGGGGATGATTTTGGCAAGGTGGATCCATCTAGCATTTTGTACA
ATGGTCCTTTCTTAATGAAATCCTTTGTTTCAAAATCTGTTATTGAATTCAAGAAAAATCCGAATTACTGGGATGCCAAG
AATGTCTTTGTAGATGATGTGAAATTGGCTTACTTTGATGGTAGTGATCAAGATGCACTAGCACGTAACTTTGTGGAGGG
TGCCTATAGTTATGCTCGTCTCTATCCAAATAGCTCAAGTTTTGAAGGGATTAAAGAGAAGAACAAGGACAATATCGTAT
ATAGTCTTCAAGATGCGACATCTTATTTCTTAAACTTTAACTTAGATAGAAAATCTTATAAATTCACTGCTAAGACGAGT
GATGCTGAAAAGAAATCGACTCAAGAAGCCGTTCTTAATAAGAACTTCCGTCAAGCTATTAACTTTGCCTATGACCGTAC
AGCCTATGGTGCTCAATCTCAAGGTGAAGATGGTGCTACTAAGATTTTACGTAATTTGGTTGTTCCACCAAACTTCGTAA
GTATCAACGGAAAAGACTTTGGTGAAGTAGTAGCCTCTAAGATGGTCAATTATGGTAAAGAATGGCAAGGAATCAACTTT
GCTGATGCTCAAGATCCATACTACAATCCAGAAAAAGCCAAGGCTAAATTTGCCGAAGCTAAGAAAGAACTCCAAGCTAA
AGGAGTCCAATTCCCTATCCACTTAGATAAATCTGTAGATTTGACCAATAAGGCAGAAATTCAAGGAATTAATTCCATGA
AACAATCGATTGAATCTGTCTTGGGGGCTGATAATGTTGTGATTGATGTTCACCAACTCTCTACTGAAGACTTTGATAAT
ACAAGCTATTTGGCTCAGACTGCAGCTCAGAAAGATTACGATTTATACAATGGTGGTTGGAGTGCAGACTACCAAGACCC
ATCAAGTTATCTTGAAATCTTTAATGTGAAAAGTGGTGGAGTTCTACAAAACTTAGGTCTAGAGCCTGGAGAAGTAAATG
ACAAGGCTAAGGCAGTTGGACTAGATACTTACACTCAGATGTTAGAAGATGCTAATAAAGAGCAAGATCCAGCAAAACGT
TATGAAAAATACGCTGAGGCTCAAGCTTGGTTGGTAGATAGCTCACTAGCAATTCCAAACGTATCACTTGGTGGTACACC
AACTTTGAGAAAAACAGTTCCTTTCTCTAGCCCATTCTCATTGGCGGGTAATAAAGGGGTCGAATCATACAAGTATCTCA
AATTACAAGATAAGACAGTCACAAAAGACGAGTATGAAAAAGCCAAAGAAAAATGGATGAAGGAAAAAGAAGAGTCCAAT
AAAAAAGCCCAAGAAGAATTGGCAAAACATGTCAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(76-518)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA Streptococcus salivarius strain HSISS4

57.143

100

0.577
  amiA3 Streptococcus thermophilus LMG 18311

55.842

100

0.564
  amiA3 Streptococcus thermophilus LMD-9

55.69

100

0.563

Multiple sequence alignment