Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   ACAM22_RS01595 Genome accession   NZ_AP028929
Coordinates   344774..346732 (+) Length   652 a.a.
NCBI ID   WP_261051060.1    Uniprot ID   -
Organism   Streptococcus sp. SN-1     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 339774..351732
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACAM22_RS01580 (MASAN616_03100) - 340757..341239 (-) 483 WP_000032549.1 S-ribosylhomocysteine lyase -
  ACAM22_RS01585 (MASAN616_03110) - 341334..342818 (-) 1485 WP_261051044.1 DUF1846 domain-containing protein -
  ACAM22_RS01590 (MASAN616_03120) - 342971..344578 (+) 1608 WP_261051049.1 alpha-glucosidase -
  ACAM22_RS01595 (MASAN616_03130) amiA3 344774..346732 (+) 1959 WP_261051060.1 peptide ABC transporter substrate-binding protein Regulator
  ACAM22_RS01600 (MASAN616_03140) - 347103..348548 (+) 1446 WP_101781635.1 LCP family protein -
  ACAM22_RS01605 (MASAN616_03150) cps4B 348550..349281 (+) 732 WP_261052782.1 capsular polysaccharide biosynthesis protein Cps4B -
  ACAM22_RS01610 (MASAN616_03160) cpsC 349290..349982 (+) 693 WP_101781631.1 capsular polysaccharide biosynthesis protein CpsC -
  ACAM22_RS01615 (MASAN616_03170) - 349992..350675 (+) 684 WP_101781629.1 tyrosine-protein kinase -

Sequence

Protein


Download         Length: 652 a.a.        Molecular weight: 72524.62 Da        Isoelectric Point: 4.9742

>NTDB_id=107312 ACAM22_RS01595 WP_261051060.1 344774..346732(+) (amiA3) [Streptococcus sp. SN-1]
MTTKKRVLSAGLTFAAALLLAACGQSGSDTKTYSSTFSGNPTTFNYLLDYYADNTAIITNLVDGLLENDNHGNLVPSLAE
DWSVSSDGLTYTYKLRKDAKWFTADGEEYAPVKAQDFVTGIKYAVDNKSQAIDLIQNSIKGLNDYITGADSDFSKVGVKA
IDDQTVEYTLARPEPYWNSKTMNSILFPVNEEFLNSKGKDFGTLSPDSILYSGPYLLKDFTSKSSIEYVKNPHYYDHNKV
SIEHVKLAYFDGSDQELTIRNFESGAYSIAGVYPNSSNFAKTKEKYKDNIVYSLQDKTSWYFNFNVNRKAYNHTSKTTDE
QKKSTETAVLNKNFRQAVNFALDRTAYSAQSNGEEAASKTLRNTLVPPTFVQVGDKTFGEVVASKLVNYGTEWSGINLAD
AQDAYFNKEKAQAKFAEAKKELASQGVTFPIHLDVAVDQTSKNAVTGMNSVKQTLESVLGADNIVIDVQQLSTDDFNNVA
FLAPTPADRDYDLNFDGWVGDYQDPSTYLNPFNAEDGFYLKIFGLDAQEDKAKIASLGLDTYTKMLKDADSENKDVAKRY
EKYAEAQAWMIDNSLIMSAMSSGGTASVTKVTPFTRGYSLVGIKGDGNNYKYMKLQKDTVTTKQYEEAKTKWEQESKKAI
EKAQKEAENHVK

Nucleotide


Download         Length: 1959 bp        

>NTDB_id=107312 ACAM22_RS01595 WP_261051060.1 344774..346732(+) (amiA3) [Streptococcus sp. SN-1]
ATGACTACAAAAAAGCGTGTCCTTAGTGCAGGCCTGACTTTTGCGGCTGCCTTGCTTTTAGCTGCTTGCGGACAATCAGG
TTCAGATACAAAAACTTACTCATCAACCTTTAGTGGAAACCCAACTACATTTAACTACTTGTTAGACTACTACGCTGATA
ATACAGCTATTATTACTAACCTAGTTGATGGTTTGCTTGAAAATGATAACCACGGAAACCTAGTTCCATCTTTGGCAGAA
GACTGGTCTGTTTCAAGCGACGGTCTGACTTACACCTATAAACTGAGAAAAGATGCCAAATGGTTCACAGCTGACGGTGA
AGAGTACGCCCCAGTCAAGGCACAGGATTTTGTGACAGGGATTAAGTACGCAGTGGACAATAAATCACAGGCCATTGACT
TGATACAAAACTCGATCAAGGGCTTGAATGATTATATTACAGGAGCGGATTCTGACTTTTCTAAGGTTGGGGTGAAGGCC
ATTGACGACCAGACTGTTGAGTATACTTTGGCACGTCCAGAACCCTACTGGAATTCAAAAACAATGAATAGTATTCTTTT
CCCAGTCAACGAAGAGTTTCTAAATTCAAAAGGGAAAGATTTTGGTACCCTATCTCCAGATAGCATTCTCTACAGCGGAC
CTTATTTGTTAAAAGATTTCACATCAAAATCATCGATCGAGTATGTGAAAAATCCGCATTACTATGATCATAATAAAGTA
TCGATTGAACACGTGAAATTGGCCTATTTTGATGGTTCAGACCAAGAATTGACCATCCGTAACTTTGAAAGTGGAGCTTA
TTCTATCGCTGGGGTTTATCCAAATAGTTCAAACTTTGCTAAGACCAAGGAAAAATATAAGGATAATATCGTCTATAGCT
TGCAGGACAAGACTTCTTGGTATTTTAATTTCAACGTCAACCGTAAGGCTTACAACCATACGTCTAAAACGACAGACGAG
CAGAAGAAGTCAACTGAGACAGCTGTCTTGAACAAAAACTTCCGCCAAGCGGTGAACTTTGCCTTGGACCGCACAGCCTA
TTCTGCTCAGTCAAATGGGGAAGAAGCGGCTAGCAAGACCCTTCGTAACACCCTAGTACCTCCTACATTTGTTCAAGTGG
GAGACAAGACCTTTGGAGAAGTAGTTGCTTCTAAATTGGTCAACTATGGTACAGAATGGTCAGGTATTAACTTGGCAGAT
GCTCAAGATGCCTATTTCAACAAAGAAAAAGCCCAAGCAAAATTTGCGGAAGCTAAAAAAGAATTGGCAAGTCAAGGTGT
GACTTTCCCTATTCACTTGGATGTTGCAGTTGATCAGACAAGTAAAAATGCTGTGACAGGCATGAACTCAGTTAAGCAGA
CCCTTGAGTCAGTTTTAGGTGCCGATAACATTGTCATTGATGTTCAACAACTTTCAACAGATGATTTTAATAACGTAGCC
TTCTTGGCACCGACACCAGCTGATCGTGACTATGATTTGAACTTTGATGGTTGGGTAGGTGACTACCAGGATCCATCAAC
TTATCTCAATCCTTTCAATGCAGAGGATGGATTCTATCTCAAGATCTTTGGTCTAGATGCTCAGGAAGATAAAGCTAAGA
TTGCTAGCCTGGGGCTTGATACCTACACCAAGATGCTCAAAGATGCAGATAGTGAAAATAAAGATGTAGCCAAACGCTAT
GAAAAATATGCTGAAGCACAGGCTTGGATGATTGACAATTCTCTGATTATGTCAGCAATGTCAAGTGGTGGTACAGCATC
TGTAACCAAAGTAACGCCATTTACAAGAGGGTATTCACTGGTCGGTATCAAGGGTGACGGCAATAACTACAAGTACATGA
AACTGCAAAAAGATACTGTTACAACCAAACAGTATGAAGAAGCTAAGACTAAATGGGAGCAAGAAAGCAAAAAAGCCATC
GAAAAAGCTCAAAAAGAAGCAGAAAATCATGTTAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(74-517)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

50.381

100

0.508
  amiA3 Streptococcus thermophilus LMG 18311

49.924

100

0.503
  amiA Streptococcus salivarius strain HSISS4

50

100

0.503

Multiple sequence alignment