Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | ACI3L7_RS02115 | Genome accession | NZ_CP173387 |
| Coordinates | 454006..454599 (-) | Length | 197 a.a. |
| NCBI ID | WP_005432718.1 | Uniprot ID | A0A812GEL0 |
| Organism | Vibrio campbellii strain LB135 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 449006..459599
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACI3L7_RS02095 (ACI3L7_02095) | aroB | 449885..450985 (-) | 1101 | WP_045380637.1 | 3-dehydroquinate synthase | - |
| ACI3L7_RS02100 (ACI3L7_02100) | aroK | 451017..451535 (-) | 519 | WP_010443904.1 | shikimate kinase AroK | - |
| ACI3L7_RS02105 (ACI3L7_02105) | pilQ | 451724..453466 (-) | 1743 | WP_050906101.1 | type IV pilus secretin PilQ | Machinery gene |
| ACI3L7_RS02110 (ACI3L7_02110) | pilP | 453501..454016 (-) | 516 | WP_005432702.1 | pilus assembly protein PilP | Machinery gene |
| ACI3L7_RS02115 (ACI3L7_02115) | pilO | 454006..454599 (-) | 594 | WP_005432718.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| ACI3L7_RS02120 (ACI3L7_02120) | pilN | 454592..455167 (-) | 576 | WP_404970175.1 | PilN domain-containing protein | Machinery gene |
| ACI3L7_RS02125 (ACI3L7_02125) | pilM | 455151..456167 (-) | 1017 | WP_005432712.1 | type IV pilus biogenesis protein PilM | Machinery gene |
| ACI3L7_RS02130 (ACI3L7_02130) | - | 456346..458913 (+) | 2568 | WP_038889585.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 197 a.a. Molecular weight: 23002.49 Da Isoelectric Point: 4.8135
>NTDB_id=1071914 ACI3L7_RS02115 WP_005432718.1 454006..454599(-) (pilO) [Vibrio campbellii strain LB135]
MVNWQDLEMDEIAEWPLVPQLVAILLMVVLIQGFGYWFYLKPEEARLNTLIQEEQTLKVALRIKANKVAALPQLQSQLDE
LTTRYELLLQQLPAQKELATMLASVNELGIDNKLTFTRIDWGDKESEHFLYRLPLNIELTGDFHDIGRFSQAIATLPRII
TFQDVTWQRVSQESETLHFRVRANTYQFKPEEKKDAK
MVNWQDLEMDEIAEWPLVPQLVAILLMVVLIQGFGYWFYLKPEEARLNTLIQEEQTLKVALRIKANKVAALPQLQSQLDE
LTTRYELLLQQLPAQKELATMLASVNELGIDNKLTFTRIDWGDKESEHFLYRLPLNIELTGDFHDIGRFSQAIATLPRII
TFQDVTWQRVSQESETLHFRVRANTYQFKPEEKKDAK
Nucleotide
Download Length: 594 bp
>NTDB_id=1071914 ACI3L7_RS02115 WP_005432718.1 454006..454599(-) (pilO) [Vibrio campbellii strain LB135]
ATGGTTAATTGGCAAGACCTAGAAATGGATGAAATCGCTGAATGGCCGCTGGTACCTCAGTTGGTAGCGATTCTTCTTAT
GGTAGTGTTGATTCAAGGTTTTGGTTACTGGTTTTATTTGAAGCCAGAGGAAGCTCGCCTTAATACCTTGATCCAAGAAG
AGCAGACTTTAAAAGTCGCGCTGAGGATCAAAGCCAATAAAGTCGCTGCACTGCCGCAGCTTCAGTCACAACTTGATGAA
CTGACCACCCGCTATGAACTGCTTTTGCAACAACTGCCGGCACAGAAAGAATTGGCGACCATGCTAGCGTCGGTTAATGA
ACTCGGCATCGATAACAAGCTGACATTTACGCGTATTGATTGGGGAGATAAAGAGTCAGAGCACTTCCTTTACCGTTTGC
CGCTCAATATTGAGCTAACGGGTGACTTCCATGACATCGGTCGTTTTTCACAGGCCATCGCCACCTTACCACGCATCATC
ACATTTCAAGATGTAACTTGGCAGCGAGTCAGTCAAGAGAGTGAAACCTTGCACTTCCGTGTAAGAGCAAACACTTACCA
ATTCAAACCAGAGGAAAAGAAAGATGCGAAATAA
ATGGTTAATTGGCAAGACCTAGAAATGGATGAAATCGCTGAATGGCCGCTGGTACCTCAGTTGGTAGCGATTCTTCTTAT
GGTAGTGTTGATTCAAGGTTTTGGTTACTGGTTTTATTTGAAGCCAGAGGAAGCTCGCCTTAATACCTTGATCCAAGAAG
AGCAGACTTTAAAAGTCGCGCTGAGGATCAAAGCCAATAAAGTCGCTGCACTGCCGCAGCTTCAGTCACAACTTGATGAA
CTGACCACCCGCTATGAACTGCTTTTGCAACAACTGCCGGCACAGAAAGAATTGGCGACCATGCTAGCGTCGGTTAATGA
ACTCGGCATCGATAACAAGCTGACATTTACGCGTATTGATTGGGGAGATAAAGAGTCAGAGCACTTCCTTTACCGTTTGC
CGCTCAATATTGAGCTAACGGGTGACTTCCATGACATCGGTCGTTTTTCACAGGCCATCGCCACCTTACCACGCATCATC
ACATTTCAAGATGTAACTTGGCAGCGAGTCAGTCAAGAGAGTGAAACCTTGCACTTCCGTGTAAGAGCAAACACTTACCA
ATTCAAACCAGAGGAAAAGAAAGATGCGAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio campbellii strain DS40M4 |
99.474 |
96.447 |
0.959 |
| pilO | Vibrio cholerae strain A1552 |
72.251 |
96.954 |
0.701 |