Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   ABXH30_RS16530 Genome accession   NZ_CP173259
Coordinates   3281319..3283625 (-) Length   768 a.a.
NCBI ID   WP_044052948.1    Uniprot ID   -
Organism   Bacillus velezensis strain XW38     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3276319..3288625
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABXH30_RS16490 (ABXH30_16490) - 3276779..3277210 (+) 432 WP_003152066.1 Na(+)/H(+) antiporter subunit B -
  ABXH30_RS16495 (ABXH30_16495) - 3277210..3277551 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  ABXH30_RS16500 (ABXH30_16500) - 3277544..3279025 (+) 1482 WP_043867375.1 Na+/H+ antiporter subunit D -
  ABXH30_RS16505 (ABXH30_16505) - 3279031..3279507 (+) 477 WP_003152059.1 Na+/H+ antiporter subunit E -
  ABXH30_RS16510 (ABXH30_16510) - 3279507..3279791 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  ABXH30_RS16515 (ABXH30_16515) mnhG 3279775..3280149 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  ABXH30_RS16520 (ABXH30_16520) - 3280189..3280572 (-) 384 WP_003152054.1 hotdog fold thioesterase -
  ABXH30_RS16525 (ABXH30_16525) comA 3280594..3281238 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  ABXH30_RS16530 (ABXH30_16530) comP 3281319..3283625 (-) 2307 WP_044052948.1 sensor histidine kinase Regulator
  ABXH30_RS16535 (ABXH30_16535) comX 3283644..3283820 (-) 177 WP_044052947.1 competence pheromone ComX -
  ABXH30_RS16540 (ABXH30_16540) - 3283835..3284710 (-) 876 WP_026092320.1 polyprenyl synthetase family protein -
  ABXH30_RS16545 (ABXH30_16545) degQ 3284862..3285002 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  ABXH30_RS16550 (ABXH30_16550) - 3285468..3285809 (+) 342 WP_003152040.1 hypothetical protein -
  ABXH30_RS16555 (ABXH30_16555) - 3285816..3287036 (-) 1221 WP_003152038.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 768 a.a.        Molecular weight: 89260.54 Da        Isoelectric Point: 8.3570

>NTDB_id=1071196 ABXH30_RS16530 WP_044052948.1 3281319..3283625(-) (comP) [Bacillus velezensis strain XW38]
MKKFIRNFSIVLLFVSLFYVAHIIYFTQNGILVGTYVVENNNHELQVVKLSKSTYGKYMGLKEGDRIIEISGKTPTEENI
RGQYLAKAEHMKIIRGNSKIDLHNTEFISLNSSYSFFIYIIPCILFALSMLCIFYIYKVNRVKDTYSAFILIIFLLCTSI
AYLSAGGVTRGYEINRYINLFTFLNVPVLYFHFLYQYFKELKLKFSAGYVVSTLYILPVINIIIEIFQKHFAFQLVTNIN
LVTFFLEMMVVYTSIIFYGLVYRKKDHFYLLKVLLISNTIAFFPFTVFYIIPEVLFGQYIYSAIVTAPFLIIIPLALVYQ
FVVNKIYDIDFLLGRIRYYGFLSIIPTIGVVWLNILFDSKGNNFNIIQITVYVFLIFLAVFYIKELLDYKFRLKRFSEKY
NYQDSIFKYTQLLKSVSALNQVFMNLKKTILDVLPVSKAYIFEISSDGDILYFDKQNSEPNWQPYKKEFVKVSSEIGKIF
EVNQGFLMKIGERGANSYVLLCLSSINTPRLTRDEISWLKTLSFYTSVSMENILQIEELMNHLQDLKQQGSNPVWLKKLM
FTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDL
GLVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGV
GCNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=1071196 ABXH30_RS16530 WP_044052948.1 3281319..3283625(-) (comP) [Bacillus velezensis strain XW38]
TTGAAAAAATTCATTAGAAATTTTTCGATTGTATTGTTATTCGTCAGTCTCTTTTACGTCGCTCATATTATATATTTTAC
TCAAAACGGAATTTTGGTAGGAACCTATGTGGTTGAAAACAATAACCATGAATTGCAGGTTGTAAAACTCTCCAAGTCTA
CGTATGGTAAATATATGGGCTTAAAAGAGGGAGACAGGATAATTGAAATAAGCGGAAAAACACCGACAGAAGAGAATATA
AGAGGTCAATATCTAGCGAAAGCTGAACATATGAAAATAATAAGGGGTAATAGTAAAATAGACTTACATAATACTGAGTT
TATTTCCTTAAATAGCTCTTATAGTTTTTTTATCTATATTATCCCATGCATATTATTTGCTTTAAGCATGTTATGCATTT
TTTATATTTATAAAGTTAACAGAGTAAAAGATACTTATTCAGCCTTTATTTTGATTATTTTTTTATTGTGTACATCCATT
GCATATTTAAGCGCAGGTGGAGTAACTAGAGGATATGAAATAAACAGATATATTAACCTTTTTACATTTTTGAACGTACC
TGTATTATACTTTCACTTTTTGTATCAATACTTTAAAGAATTAAAATTGAAATTTTCAGCTGGTTATGTTGTGTCTACTC
TCTATATATTGCCGGTTATTAATATAATAATCGAGATATTCCAGAAGCATTTTGCCTTCCAACTTGTTACGAATATTAAT
TTAGTAACATTTTTTTTGGAAATGATGGTCGTCTATACATCCATTATTTTTTATGGACTAGTCTACCGAAAAAAGGATCA
CTTTTATTTGCTGAAAGTATTACTTATATCTAATACCATAGCCTTTTTTCCGTTTACAGTATTTTATATTATACCTGAGG
TGTTGTTCGGACAGTATATTTATTCTGCTATAGTTACGGCACCATTTTTAATAATTATTCCATTAGCTTTAGTCTATCAA
TTCGTGGTCAATAAAATCTACGATATAGACTTCTTGTTGGGCAGAATTAGATACTATGGTTTCCTTTCCATTATTCCGAC
TATTGGAGTTGTATGGCTGAATATATTATTCGACAGCAAGGGGAATAACTTTAACATTATTCAAATCACTGTATATGTAT
TTTTGATTTTTTTAGCGGTATTTTATATTAAGGAGTTATTAGACTACAAATTTCGCCTGAAACGTTTTTCAGAAAAATAT
AATTATCAAGACAGCATATTTAAATATACACAGCTTCTTAAAAGCGTATCAGCTTTAAACCAAGTGTTTATGAATCTTAA
AAAGACGATATTAGATGTGTTGCCTGTCAGTAAGGCATATATCTTTGAAATCAGTTCTGACGGAGATATTCTGTATTTTG
ATAAACAGAACAGTGAACCGAACTGGCAGCCGTATAAAAAAGAATTTGTTAAAGTCTCATCAGAGATTGGCAAGATTTTT
GAAGTAAATCAAGGTTTTCTGATGAAGATTGGAGAAAGAGGGGCAAACTCATACGTTCTGCTTTGTTTGTCGAGCATTAA
TACTCCGAGACTGACAAGAGATGAGATATCTTGGTTAAAGACATTGTCTTTTTATACAAGTGTTTCGATGGAAAACATAT
TGCAGATCGAAGAACTCATGAACCATTTACAAGACCTGAAACAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTGATG
TTTACGATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGATTTGATTTCTTTGAA
GCGCCAGTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGA
TGAATGAGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGGCCTCAGCTGCTGTATGATTTG
GGTCTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCG
GTTTACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAGC
ATTCACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTC
GGCTGCAATCAGGAAGAAGGCGGCGGACAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGA
CGGACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(568-637)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

59.144

100

0.594


Multiple sequence alignment