Detailed information NTG1071182

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: ABXH30_RS13330
• Genome accession: NZ_CP173259
• Coordinates: 2689755..2690825 (-)
• Length: 356 a.a.
• NCBI ID: WP_003153083.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain XW38
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2684755..2695825

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXH30_RS13280 (ABXH30_13280)	sipW	2684815..2685399 (-)	585	WP_012117977.1	signal peptidase I SipW	-
ABXH30_RS13285 (ABXH30_13285)	tapA	2685371..2686042 (-)	672	WP_003153099.1	amyloid fiber anchoring/assembly protein TapA	-
ABXH30_RS13290 (ABXH30_13290)	-	2686301..2686630 (+)	330	WP_003153097.1	DUF3889 domain-containing protein	-
ABXH30_RS13295 (ABXH30_13295)	-	2686670..2686849 (-)	180	WP_003153093.1	YqzE family protein	-
ABXH30_RS13300 (ABXH30_13300)	comGG	2686906..2687283 (-)	378	WP_014305410.1	competence type IV pilus minor pilin ComGG	Machinery gene
ABXH30_RS13305 (ABXH30_13305)	comGF	2687284..2687784 (-)	501	WP_236583338.1	competence type IV pilus minor pilin ComGF	-
ABXH30_RS13310 (ABXH30_13310)	comGE	2687693..2688007 (-)	315	WP_015388003.1	competence type IV pilus minor pilin ComGE	Machinery gene
ABXH30_RS13315 (ABXH30_13315)	comGD	2687991..2688428 (-)	438	WP_043867285.1	competence type IV pilus minor pilin ComGD	Machinery gene
ABXH30_RS13320 (ABXH30_13320)	comGC	2688418..2688726 (-)	309	WP_003153087.1	competence type IV pilus major pilin ComGC	Machinery gene
ABXH30_RS13325 (ABXH30_13325)	comGB	2688731..2689768 (-)	1038	WP_024085602.1	competence type IV pilus assembly protein ComGB	Machinery gene
ABXH30_RS13330 (ABXH30_13330)	comGA	2689755..2690825 (-)	1071	WP_003153083.1	competence type IV pilus ATPase ComGA	Machinery gene
ABXH30_RS13335 (ABXH30_13335)	-	2691017..2691967 (-)	951	WP_014305415.1	magnesium transporter CorA family protein	-
ABXH30_RS13340 (ABXH30_13340)	-	2692113..2693414 (+)	1302	WP_014305416.1	hemolysin family protein	-
ABXH30_RS13345 (ABXH30_13345)	-	2693453..2694283 (-)	831	WP_003153080.1	STAS domain-containing protein	-
ABXH30_RS13355 (ABXH30_13355)	-	2694489..2694869 (-)	381	WP_003153079.1	Spx/MgsR family RNA polymerase-binding regulatory protein	-
ABXH30_RS13360 (ABXH30_13360)	-	2695106..2695351 (+)	246	WP_003153078.1	DUF2626 domain-containing protein	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 40529.85 Da
• Isoelectric Point: 9.4729

>NTDB_id=1071182 ABXH30_RS13330 WP_003153083.1 2689755..2690825(-) (comGA) [Bacillus velezensis strain XW38]
MKNIETYSRNIINEAYTARASDIHIVPREKDAFIHFRIGHALVKKRVLKKEECVRLISHFKFLSAMDIGERRKPQNGSLS
LPLPTETVHLRMSTLPTMNDESLVIRLLPKRQIPPLDKLSLFRGAGAALLSFLKHSHGLLLFTGPTGSGKTTTLYSLVNY
AKRHFNRRIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLSSLH
TRDAKGAIYRLLEFGVNMTEIEQTVIAIAAQRLVDLTCPFCKEENCSVYCRMYRQTRRAGIYELLYGKNLTQCFQEAKGE
HANFQYQTLRRLIRKGIALGYVTTDNYDRWVYHEAD

Nucleotide

• Length: 1071 bp

>NTDB_id=1071182 ABXH30_RS13330 WP_003153083.1 2689755..2690825(-) (comGA) [Bacillus velezensis strain XW38]
GTGAAAAATATTGAAACATACAGCAGGAACATCATAAACGAGGCCTATACGGCAAGGGCTTCAGATATACACATTGTGCC
GAGAGAAAAGGATGCTTTCATTCATTTTCGCATCGGCCATGCTCTTGTGAAAAAAAGAGTCTTAAAAAAAGAGGAATGCG
TAAGGCTTATTTCTCATTTCAAGTTTTTATCGGCCATGGATATAGGAGAAAGACGTAAGCCGCAAAACGGGTCATTGTCT
CTGCCGCTTCCGACGGAAACCGTTCATTTGAGAATGTCAACCTTGCCGACAATGAATGATGAAAGTCTTGTCATCAGGCT
TTTGCCTAAGCGGCAGATTCCCCCTCTGGATAAACTGTCCTTATTTCGGGGGGCGGGCGCCGCACTATTGTCCTTTCTGA
AGCATTCACACGGCCTGCTTCTGTTTACCGGCCCGACCGGCTCTGGAAAAACGACCACTCTTTACTCGCTTGTCAACTAT
GCAAAACGGCATTTCAACCGGCGGATTGTCACGCTTGAAGACCCCGTAGAAACAAGAGATGAGGATGTGTTGCAAGTTCA
GGTGAATGAAAAAGCCGGAGTCACATATTCCGCCGGTTTAAAAGCGATTTTAAGACATGATCCCGATATGATCATCTTAG
GGGAAATCAGAGATGCCGAAACGGCTGAAATCGCAGTCCGCGCGGCCATGACGGGACACCTCGTTCTTTCAAGCCTGCAT
ACAAGAGATGCTAAGGGCGCCATATACAGGCTGCTGGAGTTTGGGGTGAACATGACAGAAATTGAACAAACCGTCATTGC
CATTGCCGCTCAGCGTCTGGTTGATTTAACATGTCCGTTCTGCAAAGAGGAAAACTGTTCCGTGTACTGCCGGATGTACA
GGCAGACCCGCCGTGCGGGCATTTATGAACTGCTCTACGGGAAAAACCTCACCCAATGCTTTCAGGAAGCAAAGGGAGAG
CACGCCAATTTTCAATATCAGACGCTCCGCAGGCTGATCAGAAAAGGAATCGCGCTCGGCTATGTCACAACCGACAATTA
CGATCGGTGGGTGTATCATGAAGCGGATTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (10-275)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Bacillus subtilis subsp. subtilis str. 168	82.022	100	0.82
pilB	Glaesserella parasuis strain SC1401	38.793	97.753	0.379
pilF	Thermus thermophilus HB27	37.892	98.596	0.374