Detailed information NTG0107095

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: M0579_RS03905
• Genome accession: NZ_CP007668
• Coordinates: 819391..819975 (+)
• Length: 194 a.a.
• NCBI ID: WP_002223336.1
• Uniprot ID: Q9K1A2
• Organism: Neisseria meningitidis M0579
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 814391..824975

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M0579_RS03870	-	814829..815098 (-)	270	WP_002218669.1	hypothetical protein	-
M0579_RS03875 (M0579_00720)	-	815286..816074 (-)	789	WP_002218668.1	hypothetical protein	-
M0579_RS03880 (M0579_00721)	bioH	816076..816819 (-)	744	WP_002218667.1	pimeloyl-ACP methyl ester esterase BioH	-
M0579_RS03885 (M0579_00722)	-	816818..817543 (+)	726	WP_002218666.1	ComF family protein	-
M0579_RS03890 (M0579_00723)	trmL	817608..818072 (+)	465	WP_002218664.1	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	-
M0579_RS12815	-	818083..818205 (+)	123	WP_009346050.1	hypothetical protein	-
M0579_RS03895 (M0579_00724)	-	818202..818921 (+)	720	WP_002223338.1	septal ring lytic transglycosylase RlpA family protein	-
M0579_RS03900 (M0579_00725)	-	818983..819309 (+)	327	WP_002221923.1	PepSY domain-containing protein	-
M0579_RS03905 (M0579_00726)	ruvA	819391..819975 (+)	585	WP_002223336.1	Holliday junction branch migration protein RuvA	Machinery gene
M0579_RS15765 (M0579_00727)	-	819975..820112 (+)	138	WP_002231623.1	hypothetical protein	-
M0579_RS03915 (M0579_00728)	-	820138..821994 (+)	1857	WP_002223335.1	ABC transporter ATP-binding protein	-
M0579_RS03920 (M0579_00729)	rsgA	821999..822922 (+)	924	WP_002223334.1	ribosome small subunit-dependent GTPase A	-
M0579_RS03925 (M0579_00730)	-	823183..823407 (+)	225	WP_002258037.1	exodeoxyribonuclease VII small subunit	-
M0579_RS03930 (M0579_00731)	-	823391..824287 (+)	897	WP_002218656.1	polyprenyl synthetase family protein	-
M0579_RS03935 (M0579_00732)	-	824396..824695 (-)	300	WP_002223333.1	DUF2818 family protein	-

Sequence

Protein

• Length: 194 a.a.
• Molecular weight: 20687.90 Da
• Isoelectric Point: 5.3813

>NTDB_id=107095 M0579_RS03905 WP_002223336.1 819391..819975(+) (ruvA) [Neisseria meningitidis M0579]
MISRLTGKLVEKNPPQIVIDVNGVGYEADVSMQTFYNLPPVGESVQLFTQLIIREDAHLLFGFATAEERKTFRQLIKVGG
IGAKTALGILSAMTADELARAVAEEDVKRLSSAPGIGKKTAERMVLELRGKLVAHTVTDGLFAAAPAADETEDIVSTLLA
LGYSEREAKAAVKGVPEGTDVGEGVRLALKNLLK

Nucleotide

• Length: 585 bp

>NTDB_id=107095 M0579_RS03905 WP_002223336.1 819391..819975(+) (ruvA) [Neisseria meningitidis M0579]
ATGATCAGCAGACTGACCGGCAAACTGGTTGAAAAAAACCCTCCGCAAATCGTCATCGATGTCAACGGTGTCGGCTATGA
GGCCGACGTATCGATGCAGACCTTCTACAACCTGCCGCCCGTGGGTGAAAGCGTACAACTGTTTACCCAGCTTATCATTC
GGGAAGACGCACATCTTTTATTTGGTTTTGCCACTGCGGAAGAACGCAAGACCTTCCGCCAACTGATTAAGGTCGGCGGC
ATCGGCGCGAAAACGGCTTTGGGCATTTTGTCAGCGATGACGGCAGACGAGCTGGCGCGGGCGGTTGCCGAAGAAGATGT
CAAACGCCTGTCTTCCGCGCCGGGAATCGGCAAAAAAACCGCCGAACGTATGGTCTTGGAACTGCGCGGCAAGCTGGTCG
CGCATACGGTAACGGACGGGCTGTTTGCCGCCGCACCCGCCGCCGACGAAACGGAAGACATCGTCAGCACGCTGCTTGCG
CTGGGTTACAGCGAACGCGAAGCAAAAGCGGCGGTCAAAGGCGTTCCGGAGGGGACGGACGTGGGCGAAGGCGTGCGCCT
TGCTTTGAAAAACCTGCTGAAATAA

Domains

Predicted by InterProScan.

• RuvA N terminal domain (RuvA_N) (1-62)

• Helix-hairpin-helix domain (HHH_5) (72-129)

• RuvA, C-terminal domain (RuvA_C) (150-192)

3D structure

• AlphaFold DB: Q9K1A2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Streptococcus pneumoniae R6	37.5	100	0.387
ruvA	Streptococcus pneumoniae D39	37.5	100	0.387
ruvA	Streptococcus pneumoniae TIGR4	37	100	0.381
ruvA	Bacillus subtilis subsp. subtilis str. 168	35.437	100	0.376