Detailed information NTG1070848

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACIVJH_RS02505
• Genome accession: NZ_CP173226
• Coordinates: 459109..460329 (+)
• Length: 406 a.a.
• NCBI ID: WP_113852134.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain NCTC 8375 [B 5025]
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 454109..465329

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACIVJH_RS02485	-	454860..455861 (+)	1002	WP_003686999.1	thiamine ABC transporter substrate-binding protein	-
ACIVJH_RS02490	-	455955..456803 (+)	849	WP_033910263.1	mechanosensitive ion channel family protein	-
ACIVJH_RS02495	-	456829..457311 (+)	483	WP_003694396.1	CinA family protein	-
ACIVJH_RS02500	msrAB	457395..458963 (-)	1569	WP_003694393.1	bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	-
ACIVJH_RS02505	pilA	459109..460329 (+)	1221	WP_113852134.1	signal recognition particle-docking protein FtsY	Machinery gene
ACIVJH_RS02510	-	460598..461368 (-)	771	WP_404376804.1	opacity family porin	-
ACIVJH_RS02515	pilE	461866..462378 (-)	513	WP_404376467.1	pilin	Machinery gene
ACIVJH_RS02520	-	462747..462890 (-)	144	WP_113852158.1	large pilS cassette protein	-
ACIVJH_RS02525	-	463193..463296 (-)	104	Protein_476	pilin	-
ACIVJH_RS02530	pilE	463434..463844 (-)	411	WP_170123235.1	pilin	Machinery gene
ACIVJH_RS02535	lpxC	463950..464873 (-)	924	WP_003687007.1	UDP-3-O-acyl-N-acetylglucosamine deacetylase	-

Sequence

Protein

• Length: 406 a.a.
• Molecular weight: 43217.48 Da
• Isoelectric Point: 4.8464

>NTDB_id=1070848 ACIVJH_RS02505 WP_113852134.1 459109..460329(+) (pilA) [Neisseria gonorrhoeae strain NCTC 8375 [B 5025]]
MFSFFRRKKKQETPALEEAQVQETAAKVESEVAQIVGNIKEDVESLAETVSGAVEQVKETVAEMPSEAGEAAERVESAKE
AVAETVGEAVGQVQEAVATTEEHKLGWAARLKQGLAKSRDKMAKSLAGVFGGGQIGEDLYEELETVLITGDMGMEATEYL
MKDVRGRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKYFQAQGKSVLLA
AGDTFRAAAREQLQAWGGRNNVTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAI
PGAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGIDDLRPFDARAF
VDALLD

Nucleotide

• Length: 1221 bp

>NTDB_id=1070848 ACIVJH_RS02505 WP_113852134.1 459109..460329(+) (pilA) [Neisseria gonorrhoeae strain NCTC 8375 [B 5025]]
ATGTTCAGCTTCTTCCGTCGCAAGAAAAAACAGGAAACGCCGGCTCTCGAGGAGGCCCAAGTTCAGGAAACCGCAGCAAA
AGTAGAATCTGAAGTTGCTCAAATAGTTGGAAATATTAAAGAAGATGTCGAATCTTTAGCAGAAACCGTCAGCGGTGCGG
TTGAACAGGTAAAGGAAACCGTTGCCGAGATGCCGTCTGAAGCAGGGGAAGCGGCGGAACGCGTTGAATCCGCAAAAGAA
GCTGTTGCCGAAACCGTCGGCGAGGCTGTCGGGCAAGTTCAAGAAGCCGTTGCGACAACTGAAGAACACAAGCTCGGTTG
GGCTGCGCGTTTGAAACAAGGCTTGGCCAAATCACGCGACAAAATGGCGAAATCGCTGGCCGGCGTGTTCGGCGGCGGAC
AAATCGGCGAGGATTTGTACGAAGAGCTGGAAACCGTGCTGATTACCGGCGATATGGGCATGGAGGCCACCGAATACCTG
ATGAAAGACGTGCGCGGCCGCGTCAGCCTCAAAGGGCTGAAAGACGGCAACGAATTGCGCGGCGCGTTGAAAGAAGCCTT
GTACGACCTGATTAAGCCGTTGGAAAAACCGCTGGTCTTGCCCGAAACTAAAGAGCCTTTCGTGATTATGCTTGCCGGTA
TCAACGGCGCGGGCAAAACCACGTCTATCGGCAAACTCGCCAAATATTTCCAAGCGCAGGGCAAATCCGTATTGCTGGCG
GCAGGCGATACTTTCCGCGCCGCCGCGCGCGAGCAGCTTCAGGCTTGGGGCGGGCGCAACAATGTAACCGTGATTTCACA
AACCACGGGCGATTCCGCCGCCGTGTGCTTCGATGCCGTCCAAGCCGCGAAAGCGCGCGGGATCGACATCGTGCTTGCCG
ACACCGCCGGCCGCCTGCCCACGCAGCTTCATTTGATGGAAGAAATCAAAAAAGTGAAGCGCGTGCTGCAAAAAGCCATT
CCCGGCGCGCCGCACGAAATTATCGTCGTACTCGATGCCAATATCGGGCAAAACGCCGTCAACCAAGTCAAAGCCTTTGA
CGACGCATTGGGGCTGACGGGGCTTATCGTTACCAAACTCGACGGCACGGCAAAAGGCGGCATCCTCGCCGCGCTTGCTT
CCGACCGCCCCGTCCCCGTCCGCTACATCGGTGTGGGCGAAGGCATAGACGACCTGCGCCCGTTTGACGCGCGCGCGTTT
GTGGACGCACTGCTGGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (206-405)

• SRP54-type protein, helical bundle domain (SRP54_N) (121-187)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	97.362	100	1