Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   ACIO6V_RS06200 Genome accession   NZ_CP173167
Coordinates   1227208..1228482 (-) Length   424 a.a.
NCBI ID   WP_404387349.1    Uniprot ID   -
Organism   Ligilactobacillus animalis strain D27     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1222208..1233482
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACIO6V_RS06195 (ACIO6V_06195) - 1225459..1227180 (-) 1722 WP_404387347.1 proline--tRNA ligase -
  ACIO6V_RS06200 (ACIO6V_06200) eeP 1227208..1228482 (-) 1275 WP_404387349.1 RIP metalloprotease RseP Regulator
  ACIO6V_RS06205 (ACIO6V_06205) - 1228516..1229304 (-) 789 WP_404387351.1 phosphatidate cytidylyltransferase -
  ACIO6V_RS06210 (ACIO6V_06210) - 1229304..1230080 (-) 777 WP_404387353.1 isoprenyl transferase -
  ACIO6V_RS06215 (ACIO6V_06215) frr 1230186..1230749 (-) 564 WP_004048012.1 ribosome recycling factor -
  ACIO6V_RS06220 (ACIO6V_06220) pyrH 1230758..1231480 (-) 723 WP_004048013.1 UMP kinase -
  ACIO6V_RS06225 (ACIO6V_06225) - 1231694..1232572 (+) 879 WP_221678132.1 N-acetylmuramoyl-L-alanine amidase -
  ACIO6V_RS06230 (ACIO6V_06230) rpmA 1232757..1233038 (-) 282 WP_004048016.1 50S ribosomal protein L27 -
  ACIO6V_RS06235 (ACIO6V_06235) - 1233061..1233387 (-) 327 WP_135998686.1 ribosomal-processing cysteine protease Prp -

Sequence


Protein


Download         Length: 424 a.a.        Molecular weight: 46755.73 Da        Isoelectric Point: 8.9707

>NTDB_id=1070374 ACIO6V_RS06200 WP_404387349.1 1227208..1228482(-) (eeP) [Ligilactobacillus animalis strain D27]
MITTIITFIIVFGILVFVHEFGHYYFAKRAGILVREFAIGMGPKLFAYRKNGTTYTWRILPLGGYVSMAGLEDDTEELKK
GMPVSLITDENGVVQKINTSKKLTLVEGIPLELTDWDLTDGLWVEGYENGTEDEIKRFKVDHDALIIGKDGIELQIAPRD
VRFQSASLVDRMLTNFAGPLNNFLLAIVAFGLVAFLQGGVPVTTNTIAQVQTDSVAQKAGLKANDTIITIDGAKTPTWDD
VAQHIRSADGKELVLTVKRADKKQNIKVTPVQKNVNGQMVAQIGIIAKGKMDRSIKAKLTYGFTQTWYVIKQLGNALASM
LHGFSLNDLGGPVAMFSLTSQAKENGLISVVTLTALLSVNLGIINLLPIPALDGGKLLLNIIEAIRRKPLDPEKEIIITM
IGFGFLMILMLLVTWNDIQRYFFR

Nucleotide


Download         Length: 1275 bp        

>NTDB_id=1070374 ACIO6V_RS06200 WP_404387349.1 1227208..1228482(-) (eeP) [Ligilactobacillus animalis strain D27]
ATGATAACAACTATAATTACATTTATCATCGTCTTTGGGATCTTAGTATTTGTCCATGAATTTGGACACTATTATTTTGC
CAAACGTGCTGGGATCTTGGTCCGTGAATTTGCGATCGGGATGGGACCTAAACTGTTTGCATATCGCAAGAATGGCACGA
CCTATACTTGGCGGATCTTACCACTGGGTGGTTATGTCAGCATGGCAGGTTTGGAAGATGATACCGAAGAGCTAAAAAAA
GGGATGCCAGTCAGTTTGATCACTGACGAAAATGGTGTCGTTCAAAAGATAAATACTAGTAAAAAGCTCACTTTAGTCGA
AGGGATCCCGCTCGAATTGACTGACTGGGATCTAACGGATGGACTTTGGGTCGAAGGGTATGAAAACGGCACTGAAGATG
AGATCAAACGCTTCAAAGTTGATCACGATGCCTTGATCATCGGTAAAGATGGGATCGAACTGCAGATCGCACCACGTGAT
GTGCGTTTTCAGTCGGCTTCGTTAGTCGATCGGATGTTGACCAATTTTGCAGGGCCATTGAATAATTTCTTGTTAGCGAT
CGTAGCGTTTGGCTTAGTAGCCTTTTTACAGGGAGGGGTCCCTGTAACGACTAATACGATAGCTCAAGTTCAAACTGATT
CAGTTGCTCAAAAAGCAGGTCTAAAAGCAAATGATACGATCATTACGATCGATGGTGCTAAAACACCGACTTGGGACGAT
GTGGCCCAACATATCAGATCAGCTGATGGCAAAGAACTTGTTTTAACAGTCAAACGAGCTGATAAAAAGCAAAATATCAA
AGTCACACCAGTCCAAAAAAACGTAAATGGACAAATGGTCGCCCAGATTGGTATAATTGCTAAAGGAAAAATGGATCGTT
CTATCAAAGCCAAGCTGACTTATGGTTTTACCCAAACTTGGTATGTGATAAAACAGCTAGGAAATGCCTTAGCATCAATG
TTACACGGCTTTAGTCTAAATGATCTAGGTGGTCCAGTAGCAATGTTTTCCCTCACATCACAGGCCAAAGAAAATGGCCT
GATCAGTGTTGTGACACTAACAGCACTGTTGTCAGTTAACTTAGGGATCATCAACTTGTTACCGATTCCTGCTTTGGATG
GGGGCAAGTTGCTATTAAATATTATCGAAGCGATCAGAAGAAAACCACTTGATCCAGAAAAGGAGATCATTATCACAATG
ATCGGTTTTGGATTTTTAATGATCTTGATGCTTCTAGTTACGTGGAATGATATTCAACGCTATTTCTTCCGCTAA

Domains


Predicted by InterproScan.

(7-409)

(207-259)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

47.887

100

0.481

  eeP Streptococcus thermophilus LMD-9

47.653

100

0.479


Multiple sequence alignment