Detailed information NTG0107032

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: B6116_RS03570
• Genome accession: NZ_CP007667
• Coordinates: 683310..683894 (-)
• Length: 194 a.a.
• NCBI ID: WP_002218660.1
• Uniprot ID: A9M3B7
• Organism: Neisseria meningitidis strain B6116/77
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 678310..688894

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B6116_RS03540 (B6116_00665)	-	678739..679038 (+)	300	WP_002215645.1	DUF2818 family protein	-
B6116_RS03545 (B6116_00666)	-	679147..680043 (-)	897	WP_002226001.1	polyprenyl synthetase family protein	-
B6116_RS03550 (B6116_00667)	-	680027..680335 (-)	309	WP_002221599.1	exodeoxyribonuclease VII small subunit	-
B6116_RS03555 (B6116_00668)	rsgA	680363..681286 (-)	924	WP_002221598.1	ribosome small subunit-dependent GTPase A	-
B6116_RS03560 (B6116_00669)	-	681291..683147 (-)	1857	WP_002221597.1	ABC transporter ATP-binding protein	-
B6116_RS14680 (B6116_00670)	-	683173..683310 (-)	138	WP_002231623.1	hypothetical protein	-
B6116_RS03570 (B6116_00671)	ruvA	683310..683894 (-)	585	WP_002218660.1	Holliday junction branch migration protein RuvA	Machinery gene
B6116_RS03575 (B6116_00672)	-	683976..684302 (-)	327	WP_002218661.1	PepSY domain-containing protein	-
B6116_RS03580 (B6116_00673)	-	684356..685075 (-)	720	WP_002226003.1	septal ring lytic transglycosylase RlpA family protein	-
B6116_RS11925	-	685072..685194 (-)	123	WP_009346050.1	hypothetical protein	-
B6116_RS03585 (B6116_00674)	trmL	685205..685669 (-)	465	WP_002215661.1	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	-
B6116_RS03590 (B6116_00675)	-	685734..686459 (-)	726	WP_019742794.1	ComF family protein	-
B6116_RS03595 (B6116_00676)	bioH	686458..687201 (+)	744	WP_002231629.1	pimeloyl-ACP methyl ester esterase BioH	-
B6116_RS03600 (B6116_00677)	-	687203..687991 (+)	789	WP_002234506.1	hypothetical protein	-
B6116_RS03605 (B6116_00678)	-	688067..688693 (+)	627	WP_228372587.1	hypothetical protein	-

Sequence

Protein

• Length: 194 a.a.
• Molecular weight: 20659.85 Da
• Isoelectric Point: 5.1063

>NTDB_id=107032 B6116_RS03570 WP_002218660.1 683310..683894(-) (ruvA) [Neisseria meningitidis strain B6116/77]
MISRLTGKLVEKNPPQIVIDVNGVGYEADVSMQTFYNLPPVGESVQLFTQLIIREDAHLLFGFATAEERKTFRQLIKVGG
IGAKTALGILSAMTADELAQAVAEEDVKRLSSAPGIGKKTAERMVLELRGKLVAHTVTDGLFAAAPAADETEDIVSTLLA
LGYSEREAKAAVKGVPEGTDVGEGVRLALKNLLK

Nucleotide

• Length: 585 bp

>NTDB_id=107032 B6116_RS03570 WP_002218660.1 683310..683894(-) (ruvA) [Neisseria meningitidis strain B6116/77]
ATGATCAGCAGACTGACCGGCAAACTGGTTGAAAAAAACCCTCCGCAAATCGTCATCGATGTCAACGGTGTCGGCTATGA
GGCCGACGTATCGATGCAGACCTTCTACAACCTGCCGCCCGTGGGTGAAAGCGTACAACTGTTTACCCAGCTTATCATTC
GGGAAGACGCACATCTTTTATTTGGTTTTGCCACTGCGGAAGAACGCAAAACATTCCGCCAACTGATTAAGGTCGGCGGC
ATCGGCGCGAAAACGGCTTTGGGCATTTTGTCGGCGATGACGGCAGACGAACTGGCGCAGGCGGTTGCAGAAGAAGATGT
CAAACGCCTGTCTTCCGCGCCGGGAATCGGCAAAAAAACCGCCGAACGTATGGTCTTGGAACTGCGCGGCAAGCTGGTCG
CGCATACGGTAACGGACGGGCTGTTTGCCGCCGCACCCGCCGCCGACGAAACGGAAGACATCGTCAGCACGCTGCTTGCG
CTGGGTTACAGCGAACGCGAAGCAAAAGCGGCGGTCAAAGGCGTTCCGGAGGGGACGGACGTGGGCGAAGGCGTGCGCCT
TGCTTTGAAAAACCTGCTGAAATAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (150-192)

• Helix-hairpin-helix domain (HHH_5) (72-129)

• RuvA N terminal domain (RuvA_N) (1-62)

3D structure

• AlphaFold DB: A9M3B7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Streptococcus pneumoniae R6	38	100	0.392
ruvA	Streptococcus pneumoniae D39	38	100	0.392
ruvA	Streptococcus pneumoniae TIGR4	37.5	100	0.387
ruvA	Bacillus subtilis subsp. subtilis str. 168	35.922	100	0.381