Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   ACIHQS_RS02885 Genome accession   NZ_CP173025
Coordinates   591690..592073 (+) Length   127 a.a.
NCBI ID   WP_004877165.1    Uniprot ID   G7GFM2
Organism   Acinetobacter venetianus strain AVYS1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 586690..597073
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACIHQS_RS02855 (ACIHQS_02855) - 587184..587522 (+) 339 WP_404230379.1 DUF2004 domain-containing protein -
  ACIHQS_RS02860 (ACIHQS_02860) - 587546..587902 (+) 357 WP_404230382.1 DUF488 domain-containing protein -
  ACIHQS_RS02865 (ACIHQS_02865) - 587955..588299 (+) 345 WP_023014124.1 zinc ribbon domain-containing protein YjdM -
  ACIHQS_RS02870 (ACIHQS_02870) - 588454..588789 (+) 336 WP_404230385.1 YegP family protein -
  ACIHQS_RS02875 (ACIHQS_02875) - 588846..590561 (-) 1716 WP_404230388.1 proline--tRNA ligase -
  ACIHQS_RS02880 (ACIHQS_02880) - 590741..591409 (-) 669 WP_404230391.1 hypothetical protein -
  ACIHQS_RS02885 (ACIHQS_02885) pilG 591690..592073 (+) 384 WP_004877165.1 twitching motility response regulator PilG Regulator
  ACIHQS_RS02890 (ACIHQS_02890) - 592093..592455 (+) 363 WP_004877164.1 PleD family two-component system response regulator -
  ACIHQS_RS02895 (ACIHQS_02895) - 592495..593031 (+) 537 WP_007482460.1 chemotaxis protein CheW -
  ACIHQS_RS02900 (ACIHQS_02900) - 593079..595166 (+) 2088 WP_019383788.1 methyl-accepting chemotaxis protein -

Sequence


Protein


Download         Length: 127 a.a.        Molecular weight: 14212.33 Da        Isoelectric Point: 4.7278

>NTDB_id=1069992 ACIHQS_RS02885 WP_004877165.1 591690..592073(+) (pilG) [Acinetobacter venetianus strain AVYS1]
MEDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVVTAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSLNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=1069992 ACIHQS_RS02885 WP_004877165.1 591690..592073(+) (pilG) [Acinetobacter venetianus strain AVYS1]
ATGGAAGATAAATTTCAAAATTTAAAGGTAATGGTGATTGACGATTCAAAAACAATTCGACGTACGGCTGAAACTTTACT
CCAGCGAGAAGGTTGTGAAGTTGTGACAGCGGTTGATGGTTTTGAAGCCTTATCGAAAATTGCCGAAGCAAATCCTGATA
TCGTTTTTGTTGATATTATGATGCCGCGCTTAGACGGCTATCAGACCTGTGCCCTAATCAAGAATTCATTAAACTATCAA
AATATTCCAGTGATTATGTTGTCAAGCAAAGACGGTTTGTTTGACCAAGCAAAAGGGCGCGTTGTGGGGTCTGATGAATA
TTTAACAAAGCCATTCAGTAAAGATGAGCTGTTAAATGCGATTCGTAACCATGTTAGCGCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G7GFM2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

96.85

100

0.969

  vicR Streptococcus mutans UA159

41.88

92.126

0.386

  pilH Synechocystis sp. PCC 6803

41.228

89.764

0.37


Multiple sequence alignment