Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   ACF2JY_RS01000 Genome accession   NZ_CP172966
Coordinates   205251..205370 (-) Length   39 a.a.
NCBI ID   WP_041334633.1    Uniprot ID   A0AA96UN30
Organism   Bacillus subtilis strain cel     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 200251..210370
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF2JY_RS00980 (ACF2JY_00980) pbpG 200618..202693 (-) 2076 WP_029726084.1 transglycosylase domain-containing protein -
  ACF2JY_RS00985 (ACF2JY_00985) speE 202896..203726 (+) 831 WP_003227543.1 spermidine synthase -
  ACF2JY_RS00990 (ACF2JY_00990) speB 203787..204659 (+) 873 WP_003227545.1 agmatinase -
  ACF2JY_RS00995 (ACF2JY_00995) - 204691..205153 (-) 463 Protein_198 YbaK/EbsC family protein -
  ACF2JY_RS01000 (ACF2JY_01000) phrF 205251..205370 (-) 120 WP_041334633.1 phosphatase RapF inhibitor PhrF Regulator
  ACF2JY_RS01005 (ACF2JY_01005) rapF 205354..206499 (-) 1146 WP_086344441.1 response regulator aspartate phosphatase RapF Regulator
  ACF2JY_RS01010 (ACF2JY_01010) - 206502..206732 (+) 231 WP_024572000.1 hypothetical protein -
  ACF2JY_RS01015 (ACF2JY_01015) ywhK 206729..208084 (+) 1356 WP_046381402.1 YncE family protein -
  ACF2JY_RS01020 (ACF2JY_01020) ywhL 208124..209500 (+) 1377 WP_046381401.1 YncE family protein -
  ACF2JY_RS01025 (ACF2JY_01025) albG 209506..210207 (-) 702 WP_029726080.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4215.16 Da        Isoelectric Point: 9.5675

>NTDB_id=1069672 ACF2JY_RS01000 WP_041334633.1 205251..205370(-) (phrF) [Bacillus subtilis strain cel]
MKLKSKLLLSCLALCTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=1069672 ACF2JY_RS01000 WP_041334633.1 205251..205370(-) (phrF) [Bacillus subtilis strain cel]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTATGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

97.436

100

0.974
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment