Detailed information NTG1069673

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ACF2JY_RS01005
• Genome accession: NZ_CP172966
• Coordinates: 205354..206499 (-)
• Length: 381 a.a.
• NCBI ID: WP_086344441.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain cel
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 200354..211499

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACF2JY_RS00980 (ACF2JY_00980)	pbpG	200618..202693 (-)	2076	WP_029726084.1	transglycosylase domain-containing protein	-
ACF2JY_RS00985 (ACF2JY_00985)	speE	202896..203726 (+)	831	WP_003227543.1	spermidine synthase	-
ACF2JY_RS00990 (ACF2JY_00990)	speB	203787..204659 (+)	873	WP_003227545.1	agmatinase	-
ACF2JY_RS00995 (ACF2JY_00995)	-	204691..205153 (-)	463	Protein_198	YbaK/EbsC family protein	-
ACF2JY_RS01000 (ACF2JY_01000)	phrF	205251..205370 (-)	120	WP_041334633.1	phosphatase RapF inhibitor PhrF	Regulator
ACF2JY_RS01005 (ACF2JY_01005)	rapF	205354..206499 (-)	1146	WP_086344441.1	response regulator aspartate phosphatase RapF	Regulator
ACF2JY_RS01010 (ACF2JY_01010)	-	206502..206732 (+)	231	WP_024572000.1	hypothetical protein	-
ACF2JY_RS01015 (ACF2JY_01015)	ywhK	206729..208084 (+)	1356	WP_046381402.1	YncE family protein	-
ACF2JY_RS01020 (ACF2JY_01020)	ywhL	208124..209500 (+)	1377	WP_046381401.1	YncE family protein	-
ACF2JY_RS01025 (ACF2JY_01025)	albG	209506..210207 (-)	702	WP_029726080.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
ACF2JY_RS01030 (ACF2JY_01030)	albF	210204..211484 (-)	1281	WP_046381400.1	pitrilysin family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45631.11 Da
• Isoelectric Point: 5.1503

>NTDB_id=1069673 ACF2JY_RS01005 WP_086344441.1 205354..206499(-) (rapF) [Bacillus subtilis strain cel]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=1069673 ACF2JY_RS01005 WP_086344441.1 205354..206499(-) (rapF) [Bacillus subtilis strain cel]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAAGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.475	100	0.995
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572