Detailed information NTG1069392

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACFELK_RS23855
• Genome accession: NZ_CP172855
• Coordinates: 5154387..5155724 (+)
• Length: 445 a.a.
• NCBI ID: WP_017002067.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain 238633E_ID012
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 5149387..5160724

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFELK_RS23830 (ACFELK_23830)	pgeF	5149530..5150258 (-)	729	WP_003102588.1	peptidoglycan editing factor PgeF	-
ACFELK_RS23835 (ACFELK_23835)	rluD	5150255..5151217 (-)	963	WP_003094686.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
ACFELK_RS23840 (ACFELK_23840)	-	5151363..5152388 (+)	1026	WP_003102590.1	outer membrane protein assembly factor BamD	-
ACFELK_RS23845 (ACFELK_23845)	-	5152545..5152790 (+)	246	WP_003102591.1	PP0621 family protein	-
ACFELK_RS23850 (ACFELK_23850)	pilS	5152780..5154372 (+)	1593	WP_003094692.1	two-component system sensor histidine kinase PilS	Regulator
ACFELK_RS23855 (ACFELK_23855)	pilR	5154387..5155724 (+)	1338	WP_017002067.1	two-component system response regulator PilR	Regulator
ACFELK_RS23860 (ACFELK_23860)	thiO	5155770..5156864 (-)	1095	WP_023108762.1	glycine oxidase ThiO	-
ACFELK_RS23865 (ACFELK_23865)	-	5156999..5157508 (+)	510	WP_070743515.1	Tfp pilus assembly protein FimT/FimU	-
ACFELK_RS23870 (ACFELK_23870)	-	5157614..5158120 (+)	507	WP_003102598.1	Tfp pilus assembly protein FimT/FimU	-
ACFELK_RS23875 (ACFELK_23875)	pilV	5158111..5158668 (+)	558	WP_003094697.1	type 4a pilus minor pilin PilV	Machinery gene
ACFELK_RS23880 (ACFELK_23880)	pilW	5158665..5159489 (+)	825	WP_023114841.1	type 4a pilus minor pilin PilW	-
ACFELK_RS23885 (ACFELK_23885)	pilX	5159486..5160073 (+)	588	WP_003112826.1	type 4a pilus minor pilin PilX	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49727.02 Da
• Isoelectric Point: 5.8654

>NTDB_id=1069392 ACFELK_RS23855 WP_017002067.1 5154387..5155724(+) (pilR) [Pseudomonas aeruginosa strain 238633E_ID012]
MSRQKALIVDDEPDIRELLEITLGRMKLDTRSARNVKEARELLARESFDLCLTDMRLPDGSGLDLVQYIQQRHPQTPVAM
ITAYGSLDTAIQALKAGAFDFLTKPVDLGRLRELVATALRLRNPEAEEAPVDNRLLGESPPMRALRNQIGKLARSQAPVY
ISGESGSGKELVARLIHEQGPRIERPFVPVNCGAIPSELMESEFFGHKKGSFTGAIEDKQGLFQAASGGTLFLDEVADLP
MAMQVKLLRAIQEKAVRAVGGQQEVAVDVRILCATHKDLAAEVGAGRFRQDLYYRLNVIELRVPPLRERREDIPLLAERI
LKRLAGDTGLPAARLTGDAQEKLKNYRFPGNVRELENMLERAYTLCEDDQIQPHDLRLADAPGASQEGAASLSEIDNLED
YLEDIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGID

Nucleotide

• Length: 1338 bp

>NTDB_id=1069392 ACFELK_RS23855 WP_017002067.1 5154387..5155724(+) (pilR) [Pseudomonas aeruginosa strain 238633E_ID012]
ATGAGCCGACAAAAAGCCCTGATCGTCGACGATGAACCGGATATCCGCGAACTGCTGGAAATCACTCTCGGCCGCATGAA
GCTGGACACCCGCAGCGCCCGCAACGTCAAGGAAGCCCGCGAGTTGCTGGCCCGCGAGTCGTTCGACCTGTGCCTCACCG
ACATGCGCCTGCCGGACGGCAGCGGCCTCGATCTGGTCCAGTACATCCAGCAGCGCCATCCACAGACCCCGGTGGCCATG
ATCACCGCGTACGGCAGCCTGGACACCGCGATCCAGGCGCTCAAGGCCGGTGCCTTCGACTTCCTCACCAAACCGGTCGA
CCTCGGTCGCTTGCGGGAGCTGGTGGCAACCGCCCTGCGCTTGCGCAACCCGGAAGCCGAGGAAGCGCCGGTGGACAACC
GCCTGCTCGGCGAGTCGCCGCCGATGCGCGCCCTGCGCAACCAGATCGGCAAGCTGGCGCGCAGCCAGGCGCCGGTCTAC
ATCAGTGGCGAGTCCGGTAGCGGCAAGGAGCTGGTGGCGCGCCTGATCCACGAGCAGGGGCCACGTATCGAGCGGCCGTT
CGTGCCGGTGAACTGCGGCGCGATTCCCTCCGAACTGATGGAAAGCGAGTTCTTCGGCCACAAGAAAGGCAGCTTCACTG
GCGCTATCGAAGACAAGCAGGGCCTGTTCCAGGCCGCCAGCGGCGGCACCCTGTTCCTCGACGAAGTCGCCGACCTGCCG
ATGGCCATGCAGGTCAAACTGCTCCGGGCGATCCAGGAAAAGGCCGTGCGCGCGGTCGGCGGCCAGCAGGAGGTCGCCGT
CGACGTGCGCATCCTCTGCGCCACCCACAAGGACCTCGCCGCCGAAGTCGGCGCCGGGCGCTTCCGCCAGGACCTCTACT
ACCGCCTCAACGTCATCGAGCTGCGCGTACCGCCGCTGCGCGAACGCCGCGAGGACATCCCGCTGCTCGCCGAACGCATC
CTCAAGCGCCTGGCCGGCGACACCGGCCTGCCGGCCGCCAGGCTGACCGGCGACGCACAGGAGAAGCTGAAGAACTACCG
CTTCCCGGGCAACGTCCGCGAGCTGGAAAACATGCTGGAGCGCGCCTACACCCTGTGCGAAGACGACCAGATCCAGCCTC
ACGACCTGCGCCTGGCCGATGCGCCGGGTGCCAGCCAGGAAGGCGCCGCGAGCCTGAGCGAAATAGACAACCTCGAGGAC
TACCTGGAAGACATCGAGCGCAAGCTGATCATGCAGGCGCTCGAGGAGACCCGCTGGAACCGCACCGCCGCGGCCCAGCG
CCTGGGCCTGACGTTCCGCTCGATGCGCTACCGCCTGAAAAAGCTGGGCATCGACTGA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (135-301)

• Response regulator receiver domain (Response_reg) (7-115)

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	99.775	100	0.998
pilR	Acinetobacter baumannii strain A118	51.198	100	0.528
luxO	Vibrio cholerae strain A1552	38.17	100	0.384