Detailed information NTG0106937

Bioinformatically predicted

Overview

• Name: luxQ
• Type: Regulator
• Locus tag: AADG46_RS17880
• Genome accession: NZ_AP028806
• Coordinates: 725518..728091 (-)
• Length: 857 a.a.
• NCBI ID: WP_085603326.1
• Uniprot ID: -
• Organism: Vibrio cholerae strain VN152
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 720518..733091

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AADG46_RS17865 (VNVC001_33570)	-	721258..722946 (-)	1689	WP_114741302.1	ABC transporter ATP-binding protein	-
AADG46_RS17870 (VNVC001_33580)	-	722939..724591 (-)	1653	WP_114741301.1	ABC transporter ATP-binding protein	-
AADG46_RS17875 (VNVC001_33600)	-	724861..725526 (+)	666	WP_340702024.1	flagellar brake protein	-
AADG46_RS17880 (VNVC001_33610)	luxQ	725518..728091 (-)	2574	WP_085603326.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
AADG46_RS17885 (VNVC001_33620)	luxP	728109..729203 (-)	1095	WP_114709149.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
AADG46_RS17890 (VNVC001_33630)	traF	729415..730575 (-)	1161	WP_114793959.1	conjugal transfer protein TraF	-
AADG46_RS17895 (VNVC001_33640)	-	730677..730982 (-)	306	WP_000448830.1	GIY-YIG nuclease family protein	-
AADG46_RS17900 (VNVC001_33650)	-	730982..731632 (-)	651	WP_001025625.1	YceH family protein	-
AADG46_RS17905 (VNVC001_33660)	-	731674..731871 (-)	198	WP_001246071.1	hypothetical protein	-
AADG46_RS17910 (VNVC001_33670)	-	732059..732379 (+)	321	WP_001089529.1	DUF496 family protein	-
AADG46_RS17915 (VNVC001_33680)	-	732792..733043 (+)	252	WP_001882582.1	YgjV family protein	-

Sequence

Protein

• Length: 857 a.a.
• Molecular weight: 97083.04 Da
• Isoelectric Point: 6.3095

>NTDB_id=106937 AADG46_RS17880 WP_085603326.1 725518..728091(-) (luxQ) [Vibrio cholerae strain VN152]
MNIRPSQIKHKQRIASFITHAVVVVMGVLIVSVLFQSYQISSRLMAQEGQRTSVQTSSLIQSLFDFRLAALRIHQDSTAK
NISLINALVSRDSSRLDAFFSSVDELELSNAPDLRFISSHDNILWDDGSASFYGIAQQELKKLIRKVAISGNWHLVQTSG
DGKPVHLLMRRSSLIETGTGQVVGYLYVGIVLNDNFALLENIRSGSNSENLVLTVDTTPLVSTLKGNEPYSLDYVVHSGK
DVMRDSFIVGQTFLEVENVPTYLCVYSIQTNQNVLTLRDNFYFWMAFALLSMIGVSIASRWWLQKRIQREIETLMNYTHK
LMELDTKSQFAGSKIYEFDYFGRTLEQSFRRLANKEKQFEDLFNFALSPTMLWNTSGRLIRMNPSAQIQFLREDAQNHFL
FEILERQLLPTITKAAQGNNPSDVTTEVDGRVYRWNLSPIMVEGQIISIITQGQDITTIAEAEKQSQAARREAEESARVR
AEFLAKMSHELRTPLNGVLGVSQLLKRTPLNDEQREHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRLKELVC
AIDRIYRPLCHEKGLELVVNSNITTTTIVRSDQIRINQILFNLLNNAIKFTHQGSIRVELQLIEGDPLAQLVIQVVDTGI
GIREQDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEYGIGTRFEIQLPIELVERPDAQQQLLPAP
DPQPLFDKTLRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYLDGVETTRTIKKVLH
LPVVVYACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHKALEHFKYHHGQKNAGLN

Nucleotide

• Length: 2574 bp

>NTDB_id=106937 AADG46_RS17880 WP_085603326.1 725518..728091(-) (luxQ) [Vibrio cholerae strain VN152]
TTGAACATTCGACCTAGCCAAATCAAGCATAAACAGCGCATCGCTTCATTTATCACCCATGCTGTGGTGGTGGTGATGGG
CGTTCTGATCGTCAGTGTATTATTCCAAAGTTACCAGATCAGTAGCCGCTTGATGGCTCAAGAAGGGCAACGCACCTCAG
TTCAAACCTCCAGCTTGATTCAAAGTTTGTTTGATTTTCGTCTTGCGGCACTGCGAATTCACCAAGACAGCACAGCCAAA
AATATCAGTTTAATCAATGCACTTGTCAGCCGAGATTCGAGTCGGTTGGATGCGTTTTTTTCCAGTGTCGATGAACTTGA
ACTCTCTAATGCACCGGATCTGCGGTTTATTTCCAGTCACGACAACATCCTTTGGGATGATGGCAGCGCCTCCTTTTACG
GCATTGCCCAACAAGAGCTGAAGAAGCTTATCCGTAAAGTGGCGATCAGTGGCAATTGGCACTTGGTTCAAACGTCTGGC
GATGGTAAACCCGTGCATTTGTTAATGCGCCGCTCATCACTGATTGAAACAGGAACTGGGCAGGTGGTTGGGTACCTGTA
TGTGGGAATCGTACTCAATGATAACTTTGCGCTGTTGGAAAATATCCGCAGTGGCAGTAACTCAGAAAACCTAGTTCTGA
CCGTAGACACCACACCGCTCGTCTCCACCTTGAAAGGCAATGAACCTTATTCGCTGGACTATGTGGTGCACAGTGGAAAA
GATGTCATGAGGGACAGCTTTATTGTTGGCCAAACCTTCTTAGAAGTAGAAAATGTACCGACCTATCTGTGCGTCTACTC
GATTCAGACCAACCAAAATGTGCTCACCCTGCGGGATAATTTCTATTTTTGGATGGCGTTTGCGCTGCTCAGTATGATTG
GTGTTTCCATAGCATCACGCTGGTGGTTACAAAAACGTATTCAGCGAGAAATCGAAACCCTAATGAATTACACCCATAAA
TTGATGGAGCTGGACACCAAGAGCCAGTTTGCTGGTTCTAAAATTTATGAGTTCGACTATTTTGGGCGAACGTTGGAACA
ATCATTCCGTCGTCTCGCCAATAAAGAAAAGCAGTTTGAAGATCTGTTTAACTTTGCGCTCTCACCGACCATGCTTTGGA
ATACCTCTGGTCGGCTGATCCGCATGAATCCCTCAGCGCAAATCCAGTTTTTGCGCGAAGATGCGCAAAACCATTTCTTA
TTTGAGATTCTTGAACGCCAACTATTACCGACCATCACTAAGGCGGCACAGGGCAATAATCCGAGTGACGTCACAACCGA
AGTAGATGGTCGTGTGTACCGCTGGAACCTTTCGCCGATCATGGTGGAAGGGCAGATCATTTCCATCATTACTCAAGGGC
AAGATATCACCACCATCGCGGAAGCGGAGAAACAAAGCCAAGCCGCAAGACGCGAAGCGGAAGAGTCGGCACGGGTCAGA
GCCGAGTTTTTGGCCAAAATGAGTCACGAATTGCGCACGCCGCTCAATGGTGTGCTGGGCGTTTCCCAACTGCTAAAACG
GACCCCTCTCAATGATGAACAGCGCGAACACGTGGCTGTGTTATGCAGCAGTGGTGAACATTTGCTCGCGGTGTTGAATG
ACATCTTGGATTTTTCACGCTTAGAGCAGGGCAAATTCCGTATTCAAAAGAATGAGTTTCGTCTTAAAGAGTTGGTGTGT
GCGATTGACCGCATTTATCGACCTTTATGTCATGAAAAAGGTTTGGAACTGGTGGTGAATTCCAATATCACCACCACGAC
CATTGTGCGCAGCGATCAGATCCGGATTAACCAAATCTTGTTCAATTTGCTCAATAACGCGATCAAGTTTACTCACCAAG
GTTCGATACGTGTCGAATTGCAATTAATTGAAGGCGATCCGTTAGCTCAGTTGGTGATTCAAGTCGTCGATACGGGGATT
GGTATACGCGAACAAGATTTAACGGTGATTTTTGAACCCTTCATGCAGGCTGAATCGACCACCACTCGAGAGTACGGCGG
AAGTGGTTTAGGCTTAACGATTGTGCACAGTTTAGTGGAAATGCTCAGTGGTCAGCTGCACGTCAGCTCCGAGTATGGTA
TCGGTACACGTTTTGAAATTCAGTTACCGATTGAGCTGGTAGAAAGACCGGATGCGCAGCAGCAGTTGTTACCGGCTCCT
GATCCTCAACCGTTATTTGATAAAACTCTGCGTGTACTGTTGGTGGAGGATAACCACACCAACGCCTTTATTGCTCAAGC
ATTCTGTCGTAAGTATGGCTTAGATGTGAGTTGGGTAACCGATGGACTACAGGCGATTGAAGAGCTCAAAATACATGATT
ACGACTTAGTGCTGATGGATAACCAGTTACCCTATCTGGATGGCGTTGAGACCACGCGCACCATCAAAAAGGTGCTGCAT
CTTCCGGTGGTGGTGTATGCCTGTACTGCGGATGGCTTAGAAGAAACACGGCAAGCATTTTTCCATGCGGGCGCGGAATA
TGTATTAGTGAAGCCGCTGAAAGAGCAGACTTTGCATAAAGCGCTGGAGCATTTCAAATATCATCATGGCCAAAAAAACG
CTGGCTTAAATTGA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (480-544)

• LuxQ, periplasmic (LuxQ-periplasm) (41-277)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (592-705)

• Response regulator receiver domain (Response_reg) (732-842)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxQ	Vibrio cholerae strain A1552	96.966	100	0.97