Detailed information NTG1069071

Bioinformatically predicted

Overview

• Name: comB
• Type: Regulator
• Locus tag: ACF1RT_RS01510
• Genome accession: NZ_CP172847
• Coordinates: 298432..299445 (-)
• Length: 337 a.a.
• NCBI ID: WP_002296717.1
• Uniprot ID: -
• Organism: Streptococcus mutans strain DPC6143
• Function: transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 293432..304445

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACF1RT_RS01475 (ACF1RT_01475)	-	293936..294340 (+)	405	WP_002263912.1	hypothetical protein	-
ACF1RT_RS01480 (ACF1RT_01480)	-	294463..294675 (-)	213	Protein_267	IS3 family transposase	-
ACF1RT_RS01485 (ACF1RT_01485)	-	295115..295279 (+)	165	WP_002265308.1	hypothetical protein	-
ACF1RT_RS01490 (ACF1RT_01490)	-	295663..295875 (+)	213	WP_002263744.1	Blp family class II bacteriocin	-
ACF1RT_RS01495 (ACF1RT_01495)	-	296039..296227 (+)	189	WP_400260325.1	Blp family class II bacteriocin	-
ACF1RT_RS01500 (ACF1RT_01500)	-	296713..297735 (+)	1023	WP_002263742.1	thioredoxin family protein	-
ACF1RT_RS01505 (ACF1RT_01505)	-	298027..298170 (+)	144	WP_002263740.1	hypothetical protein	-
ACF1RT_RS01510 (ACF1RT_01510)	comB	298432..299445 (-)	1014	WP_002296717.1	HlyD family efflux transporter periplasmic adaptor subunit	Regulator
ACF1RT_RS01515 (ACF1RT_01515)	-	299458..301600 (-)	2143	Protein_274	peptide cleavage/export ABC transporter	-
ACF1RT_RS01520 (ACF1RT_01520)	-	301988..302242 (+)	255	WP_002267515.1	Blp family class II bacteriocin	-
ACF1RT_RS01525 (ACF1RT_01525)	-	302287..302448 (+)	162	WP_002263734.1	Blp family class II bacteriocin	-
ACF1RT_RS01530 (ACF1RT_01530)	-	302586..302771 (+)	186	WP_002263346.1	ComC/BlpC family leader-containing pheromone/bacteriocin	-
ACF1RT_RS01535 (ACF1RT_01535)	-	303035..303298 (+)	264	WP_002269479.1	Blp family class II bacteriocin	-

Sequence

Protein

• Length: 337 a.a.
• Molecular weight: 38528.16 Da
• Isoelectric Point: 10.7202

>NTDB_id=1069071 ACF1RT_RS01510 WP_002296717.1 298432..299445(-) (comB) [Streptococcus mutans strain DPC6143]
MNPNLFKSAEFYRRRYHNFATVLIIPLVCLLVFLFIFLLFAKKEVTVLSDGEISPIKVIDVIQSKSDYPISENNLTDNHT
VKKRDVLIQYVNPAANTRQGGNNQNQNQSQNKQNKNQQQNNKNQKNGNQGQKNQNQNQNKKDQKNNNQSQQNKQGQKKTN
QSQNQQNKNQNKNQSQNKQNGNQNQNNWNQNNQNDKVTASQDGVIHTNPKYEGENLIPRGTEIAQLYPDINKTRQVLITY
YVSSKDVTRLKQGQKTHLALTKVGNDQISIRGKINSIASAATTTKKGNVFKVTAKAKVSKKDSQTIKYGLQGKTITVVEK
KTFFDYYKDKLLNKNQK

Nucleotide

• Length: 1014 bp

>NTDB_id=1069071 ACF1RT_RS01510 WP_002296717.1 298432..299445(-) (comB) [Streptococcus mutans strain DPC6143]
ATGAACCCAAATTTATTTAAAAGCGCTGAATTCTACCGAAGACGCTATCATAATTTTGCTACAGTTCTTATTATTCCTTT
GGTTTGTTTACTTGTATTTTTATTTATCTTTCTATTATTTGCTAAAAAAGAGGTCACTGTCTTGTCTGATGGCGAGATCT
CTCCCATTAAAGTAATTGATGTTATTCAATCTAAAAGTGATTATCCCATTTCTGAAAATAATTTAACAGATAATCACACC
GTTAAAAAAAGGGATGTTCTCATCCAATATGTTAATCCAGCAGCAAATACAAGACAGGGCGGAAATAATCAGAATCAAAA
TCAATCTCAAAACAAGCAAAATAAGAATCAGCAGCAAAACAATAAGAATCAAAAAAACGGCAATCAAGGTCAAAAAAATC
AAAATCAGAACCAAAATAAAAAGGATCAGAAAAACAATAACCAATCTCAGCAAAACAAGCAAGGACAAAAGAAAACTAAT
CAATCCCAAAATCAGCAGAATAAGAATCAAAATAAAAACCAATCTCAAAACAAACAAAATGGGAATCAAAACCAAAATAA
CTGGAATCAGAATAATCAAAATGATAAAGTCACAGCCAGCCAAGATGGTGTTATCCATACCAACCCCAAATATGAAGGTG
AAAACTTAATTCCTCGGGGGACTGAAATCGCACAGCTCTATCCAGATATTAACAAAACAAGACAAGTTCTGATCACTTAT
TACGTCTCCTCTAAAGATGTCACCCGCCTCAAACAAGGCCAAAAGACTCATCTTGCTTTAACCAAGGTAGGAAATGATCA
AATTTCCATTAGAGGAAAAATTAATAGTATCGCTTCAGCTGCTACAACGACGAAAAAAGGCAATGTTTTTAAAGTGACAG
CTAAAGCAAAAGTTTCTAAAAAAGACAGCCAAACCATTAAATACGGCCTCCAGGGTAAAACCATCACAGTTGTTGAAAAA
AAGACTTTCTTTGATTATTATAAAGATAAACTGTTAAATAAAAATCAAAAATAA

Domains

Predicted by InterproScan.

• HlyD family secretion protein (HlyD_3) (196-309)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comB	Streptococcus mutans UA159	99.703	100	0.997
comB/nlmE	Streptococcus mutans UA159	50	99.11	0.496