Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   ACFVP7_RS14355 Genome accession   NZ_CP172606
Coordinates   2717272..2717889 (-) Length   205 a.a.
NCBI ID   WP_004398514.1    Uniprot ID   A0AAE2SLR2
Organism   Bacillus sp. SG20033     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2712272..2722889
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFVP7_RS14325 (ACFVP7_14325) rpsT 2712574..2712840 (+) 267 WP_003229989.1 30S ribosomal protein S20 -
  ACFVP7_RS14330 (ACFVP7_14330) holA 2712855..2713898 (-) 1044 WP_029317888.1 DNA polymerase III subunit delta -
  ACFVP7_RS14335 (ACFVP7_14335) - 2713938..2714087 (-) 150 WP_003229985.1 hypothetical protein -
  ACFVP7_RS14340 (ACFVP7_14340) - 2714128..2714262 (+) 135 WP_003229983.1 YqzM family protein -
  ACFVP7_RS14345 (ACFVP7_14345) comEC 2714302..2716632 (-) 2331 WP_396582345.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ACFVP7_RS14350 (ACFVP7_14350) - 2716636..2717205 (-) 570 WP_003229978.1 ComE operon protein 2 -
  ACFVP7_RS14355 (ACFVP7_14355) comEA 2717272..2717889 (-) 618 WP_004398514.1 competence protein ComEA Machinery gene
  ACFVP7_RS14360 (ACFVP7_14360) comER 2717973..2718794 (+) 822 WP_004398597.1 late competence protein ComER -
  ACFVP7_RS14365 (ACFVP7_14365) - 2718860..2719603 (-) 744 WP_396582348.1 class I SAM-dependent DNA methyltransferase -
  ACFVP7_RS14370 (ACFVP7_14370) rsfS 2719600..2719956 (-) 357 WP_014480315.1 ribosome silencing factor -
  ACFVP7_RS14375 (ACFVP7_14375) yqeK 2719974..2720534 (-) 561 WP_017696284.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  ACFVP7_RS14380 (ACFVP7_14380) - 2720524..2721093 (-) 570 WP_004398676.1 nicotinate-nucleotide adenylyltransferase -
  ACFVP7_RS14385 (ACFVP7_14385) yhbY 2721105..2721395 (-) 291 WP_003226133.1 ribosome assembly RNA-binding protein YhbY -
  ACFVP7_RS14390 (ACFVP7_14390) aroE 2721389..2722231 (-) 843 WP_041850031.1 shikimate dehydrogenase -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 21769.45 Da        Isoelectric Point: 4.7220

>NTDB_id=1068316 ACFVP7_RS14355 WP_004398514.1 2717272..2717889(-) (comEA) [Bacillus sp. SG20033]
MNWLNQHKKAIILAASAAVFTAIMIFLATGKNKEPVKQAVPTETENTVVKQEANNDESNETIVIDIKGAVQHPGVYEMRT
GDRVSQAIEKAGGTSEQADEAQVNLAEILQDGTVVYIPKKGEETAVQQGGGGSVQSDGGKGALVNINTATLEELQGISGV
GPSKAEAIIAYREENGRFQTIEDITKVSGIGEKSFEKIKSSITVK

Nucleotide


Download         Length: 618 bp        

>NTDB_id=1068316 ACFVP7_RS14355 WP_004398514.1 2717272..2717889(-) (comEA) [Bacillus sp. SG20033]
ATGAATTGGTTGAATCAGCATAAGAAAGCAATTATTTTAGCGGCTTCTGCGGCTGTTTTCACAGCGATTATGATCTTTCT
GGCCACAGGGAAAAATAAAGAGCCGGTGAAGCAAGCTGTACCAACAGAGACAGAAAATACAGTGGTAAAGCAGGAAGCAA
ACAACGACGAGTCAAACGAAACAATTGTGATAGACATCAAAGGTGCTGTTCAGCATCCTGGCGTTTATGAAATGCGAACA
GGGGACAGAGTATCTCAGGCAATTGAGAAAGCGGGCGGGACCAGTGAACAAGCAGACGAAGCGCAAGTAAATTTGGCGGA
GATTCTGCAGGACGGGACAGTAGTGTACATCCCGAAAAAGGGAGAGGAAACAGCAGTGCAGCAAGGTGGCGGAGGGTCTG
TCCAAAGCGATGGAGGGAAGGGAGCGCTGGTGAATATCAATACAGCAACCTTAGAGGAGTTACAAGGCATCTCAGGGGTG
GGGCCATCCAAAGCTGAAGCTATTATTGCATACCGGGAAGAAAACGGGCGTTTCCAAACAATTGAAGATATCACTAAGGT
TTCAGGAATAGGTGAAAAGTCATTTGAGAAAATAAAGTCTTCCATTACAGTAAAGTGA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(142-203)

SLBB domain (SLBB)

(63-118)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Bacillus subtilis subsp. subtilis str. 168

100

100

1
  comEA Staphylococcus aureus MW2

37.273

100

0.4
  comEA Staphylococcus aureus N315

36.364

100

0.39

Multiple sequence alignment