Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | ACFVP7_RS13855 | Genome accession | NZ_CP172606 |
| Coordinates | 2630329..2630664 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus sp. SG20033 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2625329..2635664
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFVP7_RS13835 (ACFVP7_13835) | gcvT | 2625921..2627009 (-) | 1089 | WP_004398598.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| ACFVP7_RS13840 (ACFVP7_13840) | - | 2627451..2629124 (+) | 1674 | WP_153529794.1 | DEAD/DEAH box helicase | - |
| ACFVP7_RS13845 (ACFVP7_13845) | - | 2629145..2629939 (+) | 795 | WP_003230200.1 | YqhG family protein | - |
| ACFVP7_RS13850 (ACFVP7_13850) | sinI | 2630122..2630295 (+) | 174 | WP_003230187.1 | anti-repressor SinI | Regulator |
| ACFVP7_RS13855 (ACFVP7_13855) | sinR | 2630329..2630664 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| ACFVP7_RS13860 (ACFVP7_13860) | tasA | 2630757..2631542 (-) | 786 | WP_072175550.1 | biofilm matrix protein TasA | - |
| ACFVP7_RS13865 (ACFVP7_13865) | sipW | 2631606..2632178 (-) | 573 | WP_003230181.1 | signal peptidase I SipW | - |
| ACFVP7_RS13870 (ACFVP7_13870) | tapA | 2632162..2632923 (-) | 762 | WP_029726724.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ACFVP7_RS13875 (ACFVP7_13875) | - | 2633195..2633521 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| ACFVP7_RS13880 (ACFVP7_13880) | - | 2633563..2633742 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| ACFVP7_RS13885 (ACFVP7_13885) | comGG | 2633814..2634188 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| ACFVP7_RS13890 (ACFVP7_13890) | comGF | 2634189..2634572 (-) | 384 | WP_046160582.1 | ComG operon protein ComGF | Machinery gene |
| ACFVP7_RS13895 (ACFVP7_13895) | comGE | 2634598..2634945 (-) | 348 | WP_046381178.1 | ComG operon protein 5 | Machinery gene |
| ACFVP7_RS13900 (ACFVP7_13900) | comGD | 2634929..2635360 (-) | 432 | WP_046381179.1 | comG operon protein ComGD | Machinery gene |
| ACFVP7_RS13905 (ACFVP7_13905) | comGC | 2635350..2635646 (-) | 297 | WP_014477332.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=1068305 ACFVP7_RS13855 WP_003226345.1 2630329..2630664(+) (sinR) [Bacillus sp. SG20033]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=1068305 ACFVP7_RS13855 WP_003226345.1 2630329..2630664(+) (sinR) [Bacillus sp. SG20033]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCGGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCGGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |