Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   ACFSN5_RS08350 Genome accession   NZ_CP172427
Coordinates   1827718..1828719 (-) Length   333 a.a.
NCBI ID   WP_165211621.1    Uniprot ID   -
Organism   Streptococcus sp. ZJ 1593     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1822718..1833719
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFSN5_RS08335 (ACFSN5_08335) - 1823023..1824357 (-) 1335 WP_165211612.1 glycosyltransferase family 4 protein -
  ACFSN5_RS08340 (ACFSN5_08340) - 1824359..1825360 (-) 1002 WP_165211615.1 glycosyltransferase -
  ACFSN5_RS08345 (ACFSN5_08345) - 1825893..1827353 (-) 1461 WP_165211618.1 alpha-amylase -
  ACFSN5_RS08350 (ACFSN5_08350) ccpA 1827718..1828719 (-) 1002 WP_165211621.1 catabolite control protein A Regulator
  ACFSN5_RS08355 (ACFSN5_08355) - 1829485..1831134 (-) 1650 WP_165211624.1 phosphoenolpyruvate carboxykinase (ATP) -
  ACFSN5_RS08360 (ACFSN5_08360) - 1831935..1833020 (+) 1086 WP_165211627.1 Xaa-Pro peptidase family protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36471.27 Da        Isoelectric Point: 5.1283

>NTDB_id=1067681 ACFSN5_RS08350 WP_165211621.1 1827718..1828719(-) (ccpA) [Streptococcus sp. ZJ 1593]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIASMYKYNIVLASSDEDDDNEVNVINTLFAKQVDGIIFMGHHLTDKVRLEFSRSRTPVVLAGTVDLDHQFPS
VNIDEEQAAKDAVSDLAKRHKEIAFVSGPLIDDINGKVRLAGYKTGLKNAGLKFQESLVFEANYSYEEGLALAKRVLNSG
ASAAYVGEDELAAGLLNGLFEAGQTVPDDFEIITGNDSPIVKYTRPNLTSINQPIYDLGAVSMRMLTKIMNKEELDEHDI
VLNHSISKRASSK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=1067681 ACFSN5_RS08350 WP_165211621.1 1827718..1828719(-) (ccpA) [Streptococcus sp. ZJ 1593]
ATGAATACTGATGATACCATTACCATTTACGATGTAGCGCGTGAAGCCGGTGTTTCCATGGCGACTGTCAGTCGAGTTGT
CAATGGGAACAAAAATGTTAAAGAAAATACTCGTAAAAAAGTTCTTGAAGTGATTGACCGTCTGGATTACCGTCCTAATG
CGGTTGCCCGTGGCCTCGCTAGCAAAAAGACCACCACAGTTGGGGTTGTTATTCCCAATATTGCCAATAGTTATTTTTCT
ATTTTGGCCAAGGGTATTGATGATATCGCCTCTATGTATAAATACAATATCGTCCTTGCTTCCAGCGATGAAGATGATGA
TAATGAGGTCAATGTCATTAACACCCTCTTTGCTAAGCAGGTCGACGGGATTATTTTTATGGGACATCATTTGACTGATA
AGGTTCGTCTGGAATTTTCCCGCTCTCGTACACCAGTTGTTTTGGCTGGGACTGTTGACCTCGATCACCAGTTCCCAAGT
GTTAATATTGATGAAGAACAAGCGGCCAAGGATGCTGTTTCAGATTTGGCCAAACGCCACAAAGAGATTGCCTTTGTCTC
GGGGCCTCTAATTGATGATATTAATGGAAAGGTTCGTTTAGCGGGTTATAAGACCGGCCTTAAAAATGCTGGACTTAAGT
TCCAAGAAAGCCTAGTTTTTGAAGCTAACTACTCTTATGAGGAAGGCCTCGCTTTGGCAAAGCGAGTGCTCAATTCAGGA
GCTTCAGCGGCCTATGTTGGAGAAGATGAACTGGCTGCCGGCCTATTGAACGGTCTCTTTGAGGCTGGTCAAACGGTGCC
TGATGACTTCGAAATCATTACGGGCAATGATTCCCCAATTGTCAAATATACTCGGCCTAATCTGACCTCAATTAATCAAC
CGATTTATGATTTAGGTGCTGTCAGTATGCGGATGCTGACCAAGATTATGAACAAGGAAGAATTAGACGAACACGACATC
GTCCTCAACCACAGCATCAGCAAACGTGCATCAAGTAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(177-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

75.375

100

0.754
  ccpA Streptococcus pneumoniae D39

74.174

100

0.742
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

56.798

99.399

0.565

Multiple sequence alignment