Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   ACFSN5_RS05390 Genome accession   NZ_CP172427
Coordinates   1157140..1157568 (-) Length   142 a.a.
NCBI ID   WP_165210917.1    Uniprot ID   -
Organism   Streptococcus sp. ZJ 1593     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1152140..1162568
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFSN5_RS05380 (ACFSN5_05380) rcrQ 1153565..1155313 (-) 1749 WP_165210923.1 ABC transporter ATP-binding protein Regulator
  ACFSN5_RS05385 (ACFSN5_05385) rcrP 1155303..1157132 (-) 1830 WP_165210920.1 ABC transporter ATP-binding protein Regulator
  ACFSN5_RS05390 (ACFSN5_05390) rcrR 1157140..1157568 (-) 429 WP_165210917.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  ACFSN5_RS05395 (ACFSN5_05395) - 1157797..1159890 (+) 2094 WP_165329266.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -

Sequence

Protein


Download         Length: 142 a.a.        Molecular weight: 16470.13 Da        Isoelectric Point: 10.1809

>NTDB_id=1067674 ACFSN5_RS05390 WP_165210917.1 1157140..1157568(-) (rcrR) [Streptococcus sp. ZJ 1593]
MKDPFDTFRNFINSMETSVQELAKAHGVEHLAGPQGFTVSYLFENRGKEIFIKDIEEKLEISKSVASNLIKRMEKNGFIQ
VKPSQKDKRYKQIVLTDLGLDKAEKLKVFRIKIHEKVLNGIDKQDMEVARRVFTQLKSNLEK

Nucleotide


Download         Length: 429 bp        

>NTDB_id=1067674 ACFSN5_RS05390 WP_165210917.1 1157140..1157568(-) (rcrR) [Streptococcus sp. ZJ 1593]
ATGAAAGATCCTTTTGATACTTTCAGAAACTTTATCAATTCTATGGAAACTAGCGTTCAGGAATTAGCAAAAGCTCACGG
GGTAGAGCACTTAGCTGGCCCTCAGGGATTCACTGTCTCTTACCTTTTCGAAAATCGGGGCAAGGAAATTTTCATTAAGG
ACATAGAGGAAAAGCTGGAGATTTCCAAGTCTGTCGCTAGTAATCTCATTAAACGGATGGAAAAGAATGGGTTCATCCAA
GTCAAACCTTCTCAAAAGGACAAACGTTACAAGCAAATCGTTCTGACTGATTTAGGTTTGGACAAGGCAGAGAAGTTAAA
GGTTTTTCGAATCAAAATTCATGAGAAAGTTCTGAATGGTATTGATAAGCAAGACATGGAAGTTGCCCGTCGGGTTTTTA
CGCAACTGAAATCAAATTTAGAAAAGTAG

Domains

Predicted by InterproScan.

MarR family (MarR_2)

(46-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

62.676

100

0.627

Multiple sequence alignment