Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   ACFSN5_RS05385 Genome accession   NZ_CP172427
Coordinates   1155303..1157132 (-) Length   609 a.a.
NCBI ID   WP_165210920.1    Uniprot ID   -
Organism   Streptococcus sp. ZJ 1593     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1150303..1162132
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFSN5_RS05370 (ACFSN5_05370) - 1150684..1151130 (-) 447 WP_165329265.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACFSN5_RS05375 (ACFSN5_05375) - 1151591..1153018 (-) 1428 WP_241154254.1 DHA2 family efflux MFS transporter permease subunit -
  ACFSN5_RS05380 (ACFSN5_05380) rcrQ 1153565..1155313 (-) 1749 WP_165210923.1 ABC transporter ATP-binding protein Regulator
  ACFSN5_RS05385 (ACFSN5_05385) rcrP 1155303..1157132 (-) 1830 WP_165210920.1 ABC transporter ATP-binding protein Regulator
  ACFSN5_RS05390 (ACFSN5_05390) rcrR 1157140..1157568 (-) 429 WP_165210917.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  ACFSN5_RS05395 (ACFSN5_05395) - 1157797..1159890 (+) 2094 WP_165329266.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -

Sequence

Protein


Download         Length: 609 a.a.        Molecular weight: 67744.67 Da        Isoelectric Point: 9.2984

>NTDB_id=1067673 ACFSN5_RS05385 WP_165210920.1 1155303..1157132(-) (rcrP) [Streptococcus sp. ZJ 1593]
MFKIFKRLSAKEWGMIVLSTIFICLAVWMDLKTPEYMSKITTLLQNKGTTTSDIMDPGSKMLMFSFGSFLMAVCVGFLAA
RTAASFTTRLRSDIFNQVADYSQAEIKQFSVPSLLTRTTNDLTQLQIMITMAMQVVTRGPIMAVWALTKIWGKSGDWTKA
VGVAVLIVFILLSVLLFVAFPRQRKVQGLTDDLNATTRESLTGVRVVRAYNAEAYQDKKFREENENLTKLNLFVYRLMSL
MNPVMTMVSSGLTLAIYWIGAHLLSDVSIPKVDKTSPMVMKMVAEATKAVKDRISIFSDMVVFSSYAMQVVIGFMMMVAI
FIILPRALVSAKRINEVLALKSSVTFKKESKSDNGHKGEVEVHDVSFRYSKNSAAVIEHVSFKAEKGQTIAFIGSTGSGK
STLVNLIPRFYDATEGWIKIDGVKVQDYSHDDLNNKVGYIPQTAVLFSGTIRSNMEFGESAQGRLSDDAIWEALELAQAK
DFVQSKDKGLDTEVAQGGTNFSGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRILREELNKKTGDLTKLIVAQRIS
TIMDADQIIVLDQGKVVGQGTHKELLAGNPVYQEIAYSQLSKEELENED

Nucleotide


Download         Length: 1830 bp        

>NTDB_id=1067673 ACFSN5_RS05385 WP_165210920.1 1155303..1157132(-) (rcrP) [Streptococcus sp. ZJ 1593]
ATGTTCAAAATATTTAAACGCTTAAGCGCTAAAGAATGGGGCATGATTGTTCTGTCGACTATCTTTATCTGTTTAGCAGT
TTGGATGGATTTGAAGACACCTGAGTATATGTCTAAAATCACAACCTTACTGCAAAATAAAGGGACGACAACCTCAGACA
TCATGGACCCTGGTTCAAAGATGCTGATGTTCTCCTTCGGCAGCTTTTTGATGGCTGTCTGTGTTGGCTTTTTAGCAGCC
AGAACCGCTGCTAGTTTTACCACTCGCCTGCGCTCAGATATTTTCAATCAAGTAGCTGATTATTCGCAAGCTGAAATCAA
GCAGTTTTCTGTTCCGAGTCTCTTAACACGGACAACCAATGACTTGACCCAGCTGCAGATCATGATTACCATGGCTATGC
AAGTGGTCACACGGGGACCAATTATGGCAGTCTGGGCTCTGACAAAAATTTGGGGGAAGAGCGGTGATTGGACCAAGGCT
GTCGGTGTGGCTGTTTTAATTGTTTTCATTCTCTTGTCTGTTCTCTTATTTGTAGCTTTCCCCCGCCAACGTAAGGTTCA
GGGATTAACCGATGACCTTAATGCGACGACCCGTGAATCTTTGACAGGTGTTCGAGTTGTTCGTGCTTACAATGCCGAGG
CTTACCAAGATAAAAAATTCCGTGAGGAAAATGAAAATTTGACCAAGCTAAATCTCTTTGTTTATCGGCTGATGTCCTTG
ATGAACCCTGTGATGACTATGGTTTCCAGCGGTTTGACGTTAGCGATTTATTGGATTGGAGCGCATTTGCTTTCGGATGT
TTCCATTCCCAAGGTTGACAAGACTAGCCCTATGGTCATGAAAATGGTAGCAGAAGCTACTAAGGCTGTTAAAGACCGTA
TTTCCATTTTTAGTGACATGGTAGTTTTCTCTTCTTATGCCATGCAGGTTGTTATCGGCTTTATGATGATGGTGGCTATT
TTTATCATTCTGCCAAGAGCCTTGGTTTCTGCTAAGCGGATTAATGAAGTATTAGCTTTGAAATCATCTGTTACATTCAA
GAAAGAGTCCAAATCTGATAACGGGCATAAAGGAGAAGTGGAAGTTCACGATGTTTCTTTCCGCTACAGCAAGAATTCGG
CAGCCGTTATTGAGCACGTCTCTTTCAAGGCAGAAAAAGGACAGACGATTGCCTTTATCGGTTCGACCGGTTCTGGTAAA
TCAACCTTGGTCAATCTCATTCCACGTTTCTATGATGCCACCGAGGGTTGGATCAAGATCGATGGTGTCAAGGTGCAAGA
CTACAGCCACGATGACCTCAACAATAAGGTGGGCTATATTCCTCAGACGGCTGTCCTCTTTAGCGGTACTATCCGTTCCA
ATATGGAATTCGGCGAAAGCGCTCAAGGGCGCTTGAGTGATGACGCTATTTGGGAAGCTCTTGAGTTGGCTCAAGCTAAA
GACTTTGTCCAAAGCAAGGACAAGGGGCTGGATACTGAAGTGGCTCAAGGAGGAACCAACTTCTCAGGCGGGCAAAAACA
AAGATTGGCTATTGCCCGCGCTCTTGCCCGTAAGCCTGAAATTCTCATCTTTGATGATTCCTTCTCAGCTCTGGACTATA
AGACCGACAGAATTTTGCGTGAGGAACTCAATAAGAAAACTGGTGATTTAACTAAACTGATTGTTGCCCAACGGATTTCA
ACTATCATGGATGCTGATCAAATCATTGTGCTTGATCAAGGTAAGGTCGTCGGTCAAGGGACTCACAAGGAACTGCTGGC
CGGCAACCCTGTCTATCAAGAAATTGCTTACTCACAACTTTCAAAGGAGGAATTGGAAAATGAAGACTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(17-274)

ABC transporter (ABC_tran)

(378-527)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

84.185

99.672

0.839

Multiple sequence alignment