Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ACFSN5_RS05380 Genome accession   NZ_CP172427
Coordinates   1153565..1155313 (-) Length   582 a.a.
NCBI ID   WP_165210923.1    Uniprot ID   -
Organism   Streptococcus sp. ZJ 1593     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1148565..1160313
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFSN5_RS05360 (ACFSN5_05360) - 1149153..1150061 (-) 909 WP_165329263.1 glycine betaine ABC transporter substrate-binding protein -
  ACFSN5_RS05365 (ACFSN5_05365) - 1150058..1150687 (-) 630 WP_165329264.1 ABC transporter permease -
  ACFSN5_RS05370 (ACFSN5_05370) - 1150684..1151130 (-) 447 WP_165329265.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACFSN5_RS05375 (ACFSN5_05375) - 1151591..1153018 (-) 1428 WP_241154254.1 DHA2 family efflux MFS transporter permease subunit -
  ACFSN5_RS05380 (ACFSN5_05380) rcrQ 1153565..1155313 (-) 1749 WP_165210923.1 ABC transporter ATP-binding protein Regulator
  ACFSN5_RS05385 (ACFSN5_05385) rcrP 1155303..1157132 (-) 1830 WP_165210920.1 ABC transporter ATP-binding protein Regulator
  ACFSN5_RS05390 (ACFSN5_05390) rcrR 1157140..1157568 (-) 429 WP_165210917.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  ACFSN5_RS05395 (ACFSN5_05395) - 1157797..1159890 (+) 2094 WP_165329266.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 64331.76 Da        Isoelectric Point: 7.2754

>NTDB_id=1067672 ACFSN5_RS05380 WP_165210923.1 1153565..1155313(-) (rcrQ) [Streptococcus sp. ZJ 1593]
MKTKKTSLISQMTPYLKGYKALFGLAVIFSIVSSTITVIGPDKLKEMTDTMTKGLAGKIDLDKIGSIAMTLALLYIGGAI
VSYMASFIVSTLIQRFSQRLRDAIADKINKIPLKYFDSHAQGDTLSRVTNDVDLMTQSFNQSLVTMVSAIVLLIGSILMM
IKTNGALAGTAIGSVLAGFVLTGFIMARSQPLFKKQQANLAEVSGYVEEIYTGHNIVTSYNARQETKEVFEKLNKNLYTS
MWKSQFFSGIMMPMMQFIGNFGYVMVCIVGARMAINGDITMGTIVAFMTYVRIFTQPISQIAQGITQLQAARAAMGRVFE
FLGEEEMEVEDAKTKQLDKVKGDVAFEDVFFGYNPDKTIIHDFSAQAKAGQKIAIVGPTGAGKTTIVNLLMRFYEINKGK
ISIDGVNIHDMKRSEVHDAFSMVLQDTWLFEGTVKENLIFNQDHITDEQVLAATKAVGVHHYIKTLPKGYDTVLDDSVTL
SVGQKQLMTIARALLKDSPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGN
HNELMTQNGFYADLYNSQFVSA

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=1067672 ACFSN5_RS05380 WP_165210923.1 1153565..1155313(-) (rcrQ) [Streptococcus sp. ZJ 1593]
ATGAAGACTAAAAAGACCTCTCTAATCAGCCAAATGACTCCTTATTTGAAAGGATATAAAGCTCTCTTTGGTCTAGCTGT
CATCTTTTCTATTGTTTCCAGTACCATTACCGTTATTGGACCAGATAAGCTGAAAGAGATGACCGATACCATGACCAAGG
GACTGGCTGGTAAGATTGACTTGGATAAAATCGGTTCCATTGCTATGACCCTTGCTCTCTTGTATATTGGCGGGGCAATT
GTCTCTTATATGGCAAGCTTTATCGTTTCAACCCTGATTCAACGTTTTTCACAACGTTTGCGGGATGCAATTGCTGACAA
GATTAACAAGATTCCCCTCAAATACTTTGATAGTCACGCCCAAGGGGATACCTTATCGCGGGTAACCAATGATGTTGACT
TGATGACCCAATCCTTTAACCAAAGTCTGGTCACCATGGTTTCGGCTATTGTACTTTTAATTGGATCCATCTTGATGATG
ATAAAAACCAACGGTGCTTTAGCAGGAACGGCTATTGGCTCAGTCTTGGCAGGCTTTGTACTGACTGGCTTTATCATGGC
TCGCAGTCAACCGCTCTTTAAAAAACAACAGGCTAACCTAGCTGAAGTCTCTGGCTATGTTGAAGAAATTTACACTGGCC
ACAATATTGTGACTAGCTATAATGCCCGCCAAGAAACCAAAGAAGTCTTTGAAAAACTTAATAAGAATCTCTACACTAGC
ATGTGGAAGTCCCAATTTTTCTCGGGTATTATGATGCCCATGATGCAGTTCATCGGAAACTTTGGTTATGTCATGGTCTG
TATCGTTGGGGCCCGCATGGCCATCAATGGCGATATTACTATGGGAACTATTGTTGCCTTCATGACCTATGTTCGCATCT
TTACCCAGCCGATTTCTCAAATTGCTCAAGGCATTACCCAACTCCAAGCGGCTAGGGCTGCCATGGGACGCGTCTTTGAA
TTCCTTGGTGAAGAAGAAATGGAAGTTGAAGACGCTAAAACTAAGCAACTGGACAAGGTTAAGGGAGATGTCGCCTTTGA
AGATGTTTTCTTTGGCTACAACCCTGACAAAACTATTATTCATGACTTCTCAGCACAAGCCAAGGCTGGTCAAAAAATTG
CCATTGTCGGCCCAACAGGTGCTGGTAAAACGACCATTGTTAATTTACTCATGCGATTTTATGAAATCAATAAAGGTAAA
ATTTCTATCGATGGTGTTAATATCCACGACATGAAACGATCAGAAGTCCATGATGCCTTCTCCATGGTCTTGCAAGATAC
CTGGCTCTTTGAAGGAACTGTTAAAGAAAATCTGATTTTCAACCAAGACCATATCACAGATGAACAGGTGCTGGCGGCGA
CCAAGGCTGTCGGTGTCCACCACTACATTAAGACCCTGCCTAAGGGGTATGATACTGTTCTGGATGACTCGGTTACCCTA
TCTGTCGGACAAAAGCAGCTCATGACTATCGCTCGGGCCTTGCTCAAGGACTCACCGCTTTTGATTTTGGACGAAGCAAC
CTCATCGGTTGATACTCGGACAGAGGAGTTGATTCAAAAGGCTATGGACAAACTGATGGAAGGACGGACATCCTTCGTCA
TCGCCCACCGCCTGTCTACTATCCGCAATGCCGATTTGATTTTGGTCATGAAAGATGGCAATATCATCGAACAAGGTAAC
CACAATGAGCTAATGACTCAGAATGGCTTCTATGCGGATCTCTATAATTCACAATTTGTTTCTGCCTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(24-297)

ABC transporter (ABC_tran)

(361-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

85.492

99.485

0.851

Multiple sequence alignment