Detailed information NTG1067620

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: ACHGMI_RS20870
• Genome accession: NZ_CP172417
• Coordinates: 3833278..3834435 (-)
• Length: 385 a.a.
• NCBI ID: WP_003227983.1
• Uniprot ID: A0A199WDV9
• Organism: Bacillus subtilis strain AKPS2
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3828278..3839435

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACHGMI_RS20840	yvyF	3828553..3828972 (-)	420	WP_017695307.1	TIGR03826 family flagellar region protein	-
ACHGMI_RS20845	comFC	3829046..3829768 (-)	723	WP_026113628.1	comF operon protein ComFC	Machinery gene
ACHGMI_RS20850	comFB	3829732..3830014 (-)	283	Protein_4049	late competence development ComFB family protein	-
ACHGMI_RS20855	comFA	3830066..3831457 (-)	1392	WP_017695309.1	ATP-dependent helicase ComFA	Machinery gene
ACHGMI_RS20860	fakBA	3831563..3832408 (-)	846	WP_017695310.1	DegV family protein	-
ACHGMI_RS20865	degU	3832506..3833195 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
ACHGMI_RS20870	degS	3833278..3834435 (-)	1158	WP_003227983.1	two-component sensor histidine kinase DegS	Regulator
ACHGMI_RS20875	yvyE	3834652..3835305 (+)	654	WP_003227979.1	YigZ family protein	-
ACHGMI_RS20880	tagV	3835305..3836480 (+)	1176	WP_129093463.1	polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagV	-
ACHGMI_RS20885	tagO	3836553..3837629 (-)	1077	WP_003227975.1	MraY family glycosyltransferase	-
ACHGMI_RS20890	tuaH	3837774..3838967 (-)	1194	WP_072557276.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44957.76 Da
• Isoelectric Point: 6.2957

>NTDB_id=1067620 ACHGMI_RS20870 WP_003227983.1 3833278..3834435(-) (degS) [Bacillus subtilis strain AKPS2]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=1067620 ACHGMI_RS20870 WP_003227983.1 3833278..3834435(-) (degS) [Bacillus subtilis strain AKPS2]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATTGAGCTTGGCGATAAACTTGAAGTGCAAACTCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATCATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTACGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

3D structure

• AlphaFold DB: A0A199WDV9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	100	100	1