Detailed information NTG0106743

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: EN73_RS10235
• Genome accession: NZ_CP007632
• Coordinates: 2038695..2039804 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264863.1
• Uniprot ID: Q8DWQ8
• Organism: Streptococcus agalactiae strain NGBS572
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2033695..2044804

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EN73_RS10210 (EN73_10355)	-	2034067..2034906 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
EN73_RS10215 (EN73_10360)	pgsA	2034906..2035448 (-)	543	WP_000976003.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
EN73_RS10220 (EN73_10365)	yfmH	2035571..2036854 (-)	1284	WP_000217755.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
EN73_RS10225 (EN73_10370)	yfmF	2036856..2038100 (-)	1245	WP_000706188.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
EN73_RS10230 (EN73_10375)	yaaA	2038339..2038692 (+)	354	WP_000384871.1	S4 domain-containing protein YaaA	-
EN73_RS10235 (EN73_10380)	recF	2038695..2039804 (+)	1110	WP_000264863.1	DNA replication/repair protein RecF	Machinery gene
EN73_RS10240 (EN73_10385)	-	2039816..2040682 (-)	867	WP_000398683.1	GRP family sugar transporter	-
EN73_RS10245 (EN73_10390)	-	2040738..2041400 (-)	663	WP_001865840.1	helix-turn-helix domain-containing protein	-
EN73_RS10250 (EN73_10395)	guaB	2041475..2042956 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
EN73_RS10255 (EN73_10400)	-	2043113..2043598 (-)	486	WP_001034427.1	arginine repressor	-
EN73_RS10260 (EN73_10405)	-	2043608..2044288 (-)	681	WP_000628851.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42526.35 Da
• Isoelectric Point: 7.3132

>NTDB_id=106743 EN73_RS10235 WP_000264863.1 2038695..2039804(+) (recF) [Streptococcus agalactiae strain NGBS572]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LNLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLTVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFASQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=106743 EN73_RS10235 WP_000264863.1 2038695..2039804(+) (recF) [Streptococcus agalactiae strain NGBS572]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCACCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGTGGCCAT
CTTAACTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAAGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGTCTAAGACGAAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTAACAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGCTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAACATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAACGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q8DWQ8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.085	98.374	0.621
recF	Bacillus subtilis subsp. subtilis str. 168	44.565	99.729	0.444