Detailed information NTG1065846

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACG1WH_RS16435
• Genome accession: NZ_CP172238
• Coordinates: 3571042..3572415 (+)
• Length: 457 a.a.
• NCBI ID: WP_111108606.1
• Uniprot ID: -
• Organism: Stenotrophomonas maltophilia strain SM1021
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3566042..3577415

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACG1WH_RS16420	sucD	3566944..3567819 (-)	876	WP_005410793.1	succinate--CoA ligase subunit alpha	-
ACG1WH_RS16425	sucC	3567841..3569010 (-)	1170	WP_004154430.1	ADP-forming succinate--CoA ligase subunit beta	-
ACG1WH_RS16430	-	3569368..3570981 (+)	1614	WP_005414304.1	PAS domain-containing sensor histidine kinase	-
ACG1WH_RS16435	pilR	3571042..3572415 (+)	1374	WP_111108606.1	sigma-54 dependent transcriptional regulator	Regulator
ACG1WH_RS16440	pilB	3572526..3574259 (-)	1734	WP_049403029.1	type IV-A pilus assembly ATPase PilB	Machinery gene
ACG1WH_RS16445	-	3574482..3574931 (-)	450	WP_275043866.1	pilin	-
ACG1WH_RS16450	-	3575042..3575464 (-)	423	WP_049403031.1	pilin	-
ACG1WH_RS16455	pilC	3575817..3577076 (+)	1260	WP_049403032.1	type II secretion system F family protein	Machinery gene

Sequence

Protein

• Length: 457 a.a.
• Molecular weight: 49545.79 Da
• Isoelectric Point: 6.4407

>NTDB_id=1065846 ACG1WH_RS16435 WP_111108606.1 3571042..3572415(+) (pilR) [Stenotrophomonas maltophilia strain SM1021]
MNETRSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLASNPYDLCITDMRLPDGNGIELVSEIAQHYPRTPVA
MITAFGSMDLAVEALKAGAFDFVSKPVDISVLRGLVKHALELNNAERPAPGPNAEQGGRLLGHSQAMDVLRTTIGKVARS
QAPVYILGESGVGKELVARTIHAQGARAAGPFVPVNCGAIPGELMESEFFGHRKGSFSGAHADKPGLFQAAHGGTLFLDE
VAELPLQMQVKLLRAIQEKSVRAVGAANEEPVDVRILSATHKDLAELVEDGRFRHDLYYRINVIELKVPPLRERRQDLPE
LAAAVLARLARSHGRATPLLAPSALEALAQYAFPGNVRELENILERALALAEEDCIGADDLRLPQHAPRTPGSAAPAEAV
ADLQPGSAALPSYIEQLERSAIQRALEENRWNKTRTAAQLGITFRALRYKLKKLGME

Nucleotide

• Length: 1374 bp

>NTDB_id=1065846 ACG1WH_RS16435 WP_111108606.1 3571042..3572415(+) (pilR) [Stenotrophomonas maltophilia strain SM1021]
ATGAATGAAACCCGCAGCGCCCTCGTCGTCGACGACGAACGCGACATCCGCGAACTGCTGGTGCTGACCCTCGGCCGCAT
GGGGCTGCGCATCAGTACCGCCGCCAACCTGGCCGAGGCACGTGAGCTGCTGGCCAGCAATCCGTACGACCTGTGCATCA
CCGACATGCGCCTGCCCGATGGCAACGGCATCGAGCTGGTCAGCGAGATCGCCCAGCACTACCCGCGCACGCCGGTGGCG
ATGATCACCGCATTCGGCAGCATGGATCTCGCCGTGGAGGCACTGAAGGCCGGTGCGTTCGATTTCGTCAGCAAGCCGGT
GGACATCTCGGTGCTGCGCGGACTGGTCAAGCACGCGCTGGAACTCAACAACGCCGAGCGCCCCGCACCGGGCCCCAACG
CCGAACAGGGCGGGCGCCTGCTGGGCCACTCGCAGGCCATGGATGTGCTGCGCACCACCATCGGCAAGGTCGCGCGCAGC
CAGGCGCCGGTCTACATCCTCGGCGAGTCGGGCGTCGGCAAGGAGCTGGTTGCACGCACCATCCATGCCCAGGGTGCACG
CGCGGCCGGCCCGTTCGTGCCGGTCAACTGCGGCGCCATTCCCGGCGAGCTGATGGAGAGCGAATTCTTCGGCCACCGCA
AGGGCAGTTTCAGCGGCGCGCACGCTGACAAGCCTGGCCTGTTCCAGGCTGCGCACGGCGGCACCCTGTTCCTGGACGAA
GTGGCTGAACTGCCACTGCAGATGCAGGTGAAGCTGCTGCGCGCGATCCAGGAAAAGTCGGTGCGCGCGGTGGGTGCGGC
CAACGAGGAGCCAGTGGATGTCCGCATCCTCTCGGCCACCCACAAGGATCTGGCCGAGCTGGTCGAGGACGGCCGCTTCC
GCCACGACCTGTACTACCGCATCAACGTGATCGAACTGAAGGTGCCGCCGCTGCGCGAGCGCCGCCAGGACCTGCCCGAA
CTGGCCGCCGCCGTGCTGGCCCGCCTGGCCCGCAGCCACGGCCGCGCCACCCCGCTGCTGGCGCCCTCGGCGCTGGAAGC
ACTGGCGCAGTACGCGTTCCCGGGCAATGTGCGCGAGCTGGAGAACATCCTGGAACGTGCGCTGGCCCTGGCCGAGGAAG
ACTGCATCGGCGCCGATGACCTGCGCCTGCCGCAGCACGCGCCGCGTACGCCGGGCAGTGCCGCGCCCGCCGAAGCGGTG
GCCGACCTGCAGCCGGGCAGCGCCGCACTGCCCTCCTACATCGAGCAGCTCGAGCGCAGCGCCATCCAGCGTGCGCTGGA
AGAGAACCGCTGGAACAAGACCCGCACCGCCGCGCAGCTGGGCATCACCTTCCGTGCGCTGCGCTACAAGCTGAAGAAGC
TGGGGATGGAGTAG

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (414-454)

• Response regulator receiver domain (Response_reg) (8-115)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	62.555	99.344	0.621
pilR	Acinetobacter baumannii strain A118	47.948	100	0.486