Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACG3JE_RS08115 | Genome accession | NZ_CP171736 |
| Coordinates | 1592628..1593125 (-) | Length | 165 a.a. |
| NCBI ID | WP_003103409.1 | Uniprot ID | A0A0E2UEH7 |
| Organism | Streptococcus parauberis strain DB-M17 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1587628..1598125
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACG3JE_RS08100 (ACG3JE_08100) | - | 1589614..1590558 (+) | 945 | WP_003105810.1 | magnesium transporter CorA family protein | - |
| ACG3JE_RS08105 (ACG3JE_08105) | - | 1590643..1591308 (+) | 666 | WP_003107615.1 | DUF1129 domain-containing protein | - |
| ACG3JE_RS08110 (ACG3JE_08110) | rpsR | 1592300..1592539 (-) | 240 | WP_003102945.1 | 30S ribosomal protein S18 | - |
| ACG3JE_RS08115 (ACG3JE_08115) | ssb | 1592628..1593125 (-) | 498 | WP_003103409.1 | single-stranded DNA-binding protein | Machinery gene |
| ACG3JE_RS08120 (ACG3JE_08120) | rpsF | 1593146..1593436 (-) | 291 | WP_003104479.1 | 30S ribosomal protein S6 | - |
| ACG3JE_RS08125 (ACG3JE_08125) | mutY | 1594422..1595561 (+) | 1140 | WP_041828679.1 | A/G-specific adenine glycosylase | - |
| ACG3JE_RS08130 (ACG3JE_08130) | trxA | 1596042..1596356 (-) | 315 | WP_003102914.1 | thioredoxin | - |
Sequence
Protein
Download Length: 165 a.a. Molecular weight: 18163.89 Da Isoelectric Point: 4.8894
>NTDB_id=1063991 ACG3JE_RS08115 WP_003103409.1 1592628..1593125(-) (ssb) [Streptococcus parauberis strain DB-M17]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSSNSYNGGGLNNNSSSSNNSYSAPAQQTPNFGRDDSPFGNSNPMDISD
DDLPF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSSNSYNGGGLNNNSSSSNNSYSAPAQQTPNFGRDDSPFGNSNPMDISD
DDLPF
Nucleotide
Download Length: 498 bp
>NTDB_id=1063991 ACG3JE_RS08115 WP_003103409.1 1592628..1593125(-) (ssb) [Streptococcus parauberis strain DB-M17]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAAGATGCAGAACTTCGTTACACACCAAGTCAAGTGGCAGTAGC
TACTTTTACACTTGCTGTTAACCGTACATTCAAAAGTCAAAATGGGGAACGTGAAGCAGATTTCATTAACTGTGTAATCT
GGCGTCAACCAGCTGAGAACTTAGCGAATTGGGCTAAAAAGGGTGCTTTAGTTGGGATTACTGGTCGTATTCAGACTCGT
AATTATGAAAATCAACAAGGGCAACGTGTCTATGTAACTGAAGTGGTTGCGGATAATTTCCAAATGTTGGAAAGCCGTGC
TACACGTGAAGGTGGTTCATCTAACTCTTATAATGGTGGTGGATTAAATAATAATTCTTCATCATCAAACAATAGTTACT
CAGCCCCTGCTCAACAAACACCTAATTTTGGTCGCGATGATAGCCCATTTGGTAATTCAAATCCAATGGATATCTCAGAT
GACGATCTACCATTCTAA
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAAGATGCAGAACTTCGTTACACACCAAGTCAAGTGGCAGTAGC
TACTTTTACACTTGCTGTTAACCGTACATTCAAAAGTCAAAATGGGGAACGTGAAGCAGATTTCATTAACTGTGTAATCT
GGCGTCAACCAGCTGAGAACTTAGCGAATTGGGCTAAAAAGGGTGCTTTAGTTGGGATTACTGGTCGTATTCAGACTCGT
AATTATGAAAATCAACAAGGGCAACGTGTCTATGTAACTGAAGTGGTTGCGGATAATTTCCAAATGTTGGAAAGCCGTGC
TACACGTGAAGGTGGTTCATCTAACTCTTATAATGGTGGTGGATTAAATAATAATTCTTCATCATCAAACAATAGTTACT
CAGCCCCTGCTCAACAAACACCTAATTTTGGTCGCGATGATAGCCCATTTGGTAATTCAAATCCAATGGATATCTCAGAT
GACGATCTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.195 |
100 |
0.624 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
57.471 |
100 |
0.606 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.547 |
64.242 |
0.37 |