Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   ACG3JJ_RS09095 Genome accession   NZ_CP171733
Coordinates   1801977..1802978 (-) Length   333 a.a.
NCBI ID   WP_003106338.1    Uniprot ID   A0A0E2U976
Organism   Streptococcus parauberis strain DB-M5     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1796977..1807978
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACG3JJ_RS09080 (ACG3JJ_09080) - 1798068..1799399 (-) 1332 WP_003103699.1 glycosyltransferase family 4 protein -
  ACG3JJ_RS09085 (ACG3JJ_09085) - 1799401..1800399 (-) 999 WP_003104452.1 glycosyltransferase family 4 protein -
  ACG3JJ_RS09090 (ACG3JJ_09090) - 1800467..1801933 (-) 1467 WP_013793726.1 alpha-amylase -
  ACG3JJ_RS09095 (ACG3JJ_09095) ccpA 1801977..1802978 (-) 1002 WP_003106338.1 catabolite control protein A Regulator
  ACG3JJ_RS09100 (ACG3JJ_09100) - 1803150..1804235 (+) 1086 WP_004234636.1 Xaa-Pro peptidase family protein -
  ACG3JJ_RS09105 (ACG3JJ_09105) - 1804255..1804509 (-) 255 WP_041828406.1 hypothetical protein -
  ACG3JJ_RS09110 (ACG3JJ_09110) - 1804605..1805693 (-) 1089 WP_013793724.1 DUF871 domain-containing protein -
  ACG3JJ_RS09115 (ACG3JJ_09115) celB 1805763..1807100 (-) 1338 WP_003105300.1 PTS cellobiose transporter subunit IIC -
  ACG3JJ_RS09120 (ACG3JJ_09120) - 1807127..1807645 (-) 519 WP_003105572.1 hypothetical protein -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36786.99 Da        Isoelectric Point: 6.0718

>NTDB_id=1063845 ACG3JJ_RS09095 WP_003106338.1 1801977..1802978(-) (ccpA) [Streptococcus parauberis strain DB-M5]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPIVLAGTVDLEHQLPS
VNIDYKLAVSNVIDILVENHKKIAFVSGPLIDDINGKVRLLGYKEGLRKNKLDYKEGLVFEANYSYKEGFELAQRVINSG
ATAAYVGEDELAAGLLNGLFAAGKNVPEDFEIITSNDSPVVDYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEDLEEKEI
LLNHGIKRRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=1063845 ACG3JJ_RS09095 WP_003106338.1 1801977..1802978(-) (ccpA) [Streptococcus parauberis strain DB-M5]
ATGAACACAGATGATACAATTACGATCTATGACGTTGCTCGCGAAGCAGGTGTTTCTATGGCAACAGTAAGTCGTGTTGT
CAACGGAAATAAAAACGTTAAAGAAAATACACGCAAAAAAGTGTTGGAAGTTATAGACCGTTTAGATTATCGTCCTAATG
CAGTTGCCCGAGGACTAGCAAGTAAAAAAACAACTACAGTAGGTGTGGTAATTCCAAATATTGCCAATAGTTATTTTTCA
ATTTTAGCAAAAGGGATTGATGATATTGCTGCAATGTACAAGTATAATATTGTCCTTGCATCAAGTGATGAAGATGATGA
TAAAGAGGTAAATGTTGTTAACACTCTATTTGCAAAACAAGTAGATGGTATTATCTTTATGGGTCACCATTTAACAGAGA
AAATTCGTGCAGAATTTTCTCGTTCACGTACACCAATCGTTCTAGCTGGAACAGTTGACTTGGAACATCAGTTACCAAGT
GTTAATATTGATTATAAATTGGCAGTTTCCAATGTAATTGATATTTTAGTAGAAAATCACAAAAAAATTGCTTTTGTGTC
TGGACCACTAATCGATGATATCAATGGAAAAGTGAGATTACTAGGCTATAAAGAAGGACTTAGAAAGAATAAGTTGGACT
ATAAAGAAGGATTAGTTTTTGAAGCTAATTATTCTTATAAAGAAGGTTTTGAATTAGCTCAACGCGTAATCAATTCAGGT
GCTACAGCAGCTTATGTTGGAGAAGATGAATTAGCAGCAGGCTTACTTAATGGTTTATTTGCAGCAGGGAAAAATGTTCC
TGAGGACTTTGAAATTATTACAAGTAACGATTCACCAGTTGTTGACTATACAAGACCAAATCTTTCTTCAATCAGTCAAC
CTGTGTATGATTTAGGAGCTGTCAGCATGCGTATGTTGACAAAAATCATGAACAAAGAAGATTTGGAAGAAAAAGAAATT
CTCCTAAACCATGGTATCAAACGTCGTGGTACAACAAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0E2U976

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.378

100

0.784

  ccpA Streptococcus pneumoniae D39

75.676

100

0.757

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.891

99.399

0.556


Multiple sequence alignment