Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACG3JF_RS04755 | Genome accession | NZ_CP171732 |
| Coordinates | 969844..970341 (-) | Length | 165 a.a. |
| NCBI ID | WP_003103409.1 | Uniprot ID | A0A0E2UEH7 |
| Organism | Streptococcus parauberis strain DB-M3 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 964844..975341
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACG3JF_RS04740 (ACG3JF_04740) | - | 966830..967774 (+) | 945 | WP_003105810.1 | magnesium transporter CorA family protein | - |
| ACG3JF_RS04745 (ACG3JF_04745) | - | 967859..968524 (+) | 666 | WP_003107615.1 | DUF1129 domain-containing protein | - |
| ACG3JF_RS04750 (ACG3JF_04750) | rpsR | 969516..969755 (-) | 240 | WP_003102945.1 | 30S ribosomal protein S18 | - |
| ACG3JF_RS04755 (ACG3JF_04755) | ssb | 969844..970341 (-) | 498 | WP_003103409.1 | single-stranded DNA-binding protein | Machinery gene |
| ACG3JF_RS04760 (ACG3JF_04760) | rpsF | 970362..970652 (-) | 291 | WP_003104479.1 | 30S ribosomal protein S6 | - |
| ACG3JF_RS04765 (ACG3JF_04765) | mutY | 971638..972777 (+) | 1140 | WP_041828679.1 | A/G-specific adenine glycosylase | - |
| ACG3JF_RS04770 (ACG3JF_04770) | - | 972855..973217 (+) | 363 | WP_003105722.1 | hypothetical protein | - |
| ACG3JF_RS04775 (ACG3JF_04775) | trxA | 973259..973573 (-) | 315 | WP_003102914.1 | thioredoxin | - |
Sequence
Protein
Download Length: 165 a.a. Molecular weight: 18163.89 Da Isoelectric Point: 4.8894
>NTDB_id=1063771 ACG3JF_RS04755 WP_003103409.1 969844..970341(-) (ssb) [Streptococcus parauberis strain DB-M3]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSSNSYNGGGLNNNSSSSNNSYSAPAQQTPNFGRDDSPFGNSNPMDISD
DDLPF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSSNSYNGGGLNNNSSSSNNSYSAPAQQTPNFGRDDSPFGNSNPMDISD
DDLPF
Nucleotide
Download Length: 498 bp
>NTDB_id=1063771 ACG3JF_RS04755 WP_003103409.1 969844..970341(-) (ssb) [Streptococcus parauberis strain DB-M3]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAAGATGCAGAACTTCGTTACACACCAAGTCAAGTGGCAGTAGC
TACTTTTACACTTGCTGTTAACCGTACATTCAAAAGTCAAAATGGGGAACGTGAAGCAGATTTCATTAACTGTGTAATCT
GGCGTCAACCAGCTGAGAACTTAGCGAATTGGGCTAAAAAGGGTGCTTTAGTTGGGATTACTGGTCGTATTCAGACTCGT
AATTATGAAAATCAACAAGGGCAACGTGTCTATGTAACTGAAGTGGTTGCGGATAATTTCCAAATGTTGGAAAGCCGTGC
TACACGTGAAGGTGGTTCATCTAACTCTTATAATGGTGGTGGATTAAATAATAATTCTTCATCATCAAACAATAGTTACT
CAGCCCCTGCTCAACAAACACCTAATTTTGGTCGCGATGATAGCCCATTTGGTAATTCAAATCCAATGGATATCTCAGAT
GACGATCTACCATTCTAA
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAAGATGCAGAACTTCGTTACACACCAAGTCAAGTGGCAGTAGC
TACTTTTACACTTGCTGTTAACCGTACATTCAAAAGTCAAAATGGGGAACGTGAAGCAGATTTCATTAACTGTGTAATCT
GGCGTCAACCAGCTGAGAACTTAGCGAATTGGGCTAAAAAGGGTGCTTTAGTTGGGATTACTGGTCGTATTCAGACTCGT
AATTATGAAAATCAACAAGGGCAACGTGTCTATGTAACTGAAGTGGTTGCGGATAATTTCCAAATGTTGGAAAGCCGTGC
TACACGTGAAGGTGGTTCATCTAACTCTTATAATGGTGGTGGATTAAATAATAATTCTTCATCATCAAACAATAGTTACT
CAGCCCCTGCTCAACAAACACCTAATTTTGGTCGCGATGATAGCCCATTTGGTAATTCAAATCCAATGGATATCTCAGAT
GACGATCTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.195 |
100 |
0.624 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
57.471 |
100 |
0.606 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.547 |
64.242 |
0.37 |