Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   AABA14_RS09580 Genome accession   NZ_AP028607
Coordinates   1840097..1840717 (-) Length   206 a.a.
NCBI ID   WP_000839909.1    Uniprot ID   A0A098Z2X2
Organism   Streptococcus pneumoniae strain Sep2     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1835097..1845717
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AABA14_RS09555 (TKY123642_18790) recA 1835474..1836640 (-) 1167 WP_001085463.1 recombinase RecA Machinery gene
  AABA14_RS09560 (TKY123642_18800) cinA 1836695..1837951 (-) 1257 WP_338168406.1 competence/damage-inducible protein A Machinery gene
  AABA14_RS09565 (TKY123642_18810) - 1838036..1839052 (-) 1017 WP_000239278.1 LCP family protein -
  AABA14_RS09570 (TKY123642_18820) - 1839060..1839578 (-) 519 WP_000455536.1 GNAT family N-acetyltransferase -
  AABA14_RS09575 (TKY123642_18830) tsaE 1839568..1840011 (-) 444 WP_000288232.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  AABA14_RS09580 (TKY123642_18840) comM 1840097..1840717 (-) 621 WP_000839909.1 hypothetical protein Regulator
  AABA14_RS09585 (TKY123642_18850) - 1841100..1841963 (-) 864 WP_057516321.1 helix-turn-helix transcriptional regulator -
  AABA14_RS09590 (TKY123642_18860) - 1842152..1842322 (+) 171 WP_000742180.1 PhrA family quorum-sensing system peptide -
  AABA14_RS09595 (TKY123642_18870) - 1842772..1844787 (+) 2016 WP_338168407.1 DUF1430 domain-containing protein -
  AABA14_RS09600 (TKY123642_18880) - 1844789..1845421 (+) 633 WP_016398205.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 23540.66 Da        Isoelectric Point: 10.1254

>NTDB_id=106302 AABA14_RS09580 WP_000839909.1 1840097..1840717(-) (comM) [Streptococcus pneumoniae strain Sep2]
MKSMRILFLLALIQISLSSCFLWKECILSFKQSTAFFIGSMVFVSGICAGVNYLYTRKQEVHSVLASKKSVKLFYSMLLL
INLLGAVLVLSDNLFIKNTLQQELVDFLLPSFFFLFGLDLLIFLPLKKYVRDFLAMLDRKKTVLVTILATLLFLRNPMTI
VSLLIYTGLGLFFAAYLVPNSVKKEVSFYGHIFRDLVLVIVTLIFF

Nucleotide


Download         Length: 621 bp        

>NTDB_id=106302 AABA14_RS09580 WP_000839909.1 1840097..1840717(-) (comM) [Streptococcus pneumoniae strain Sep2]
ATGAAATCAATGAGAATCTTATTTTTGTTAGCTTTAATTCAAATCAGTTTGAGTAGCTGTTTCCTATGGAAGGAATGCAT
CTTGTCCTTTAAACAAAGTACAGCTTTTTTCATCGGAAGCATGGTTTTCGTTTCAGGAATCTGTGCTGGAGTAAATTATC
TTTATACCCGTAAGCAAGAAGTCCATAGTGTCCTAGCCAGTAAGAAGTCGGTGAAGCTTTTTTACAGTATGTTACTCTTA
ATTAATTTGTTAGGAGCTGTTCTTGTTTTGTCAGATAACTTGTTCATCAAAAATACGCTGCAGCAAGAATTAGTTGACTT
TTTATTGCCATCCTTCTTTTTCCTATTTGGGCTAGATTTGCTGATTTTTTTACCCTTGAAAAAATACGTGCGCGATTTTC
TTGCTATGCTAGACAGAAAAAAGACAGTGTTGGTGACTATTTTAGCAACACTTCTTTTCTTAAGAAATCCAATGACCATT
GTCTCACTTCTGATTTATACTGGACTGGGCTTGTTTTTTGCAGCCTATCTTGTCCCAAATTCGGTTAAGAAGGAAGTTTC
CTTTTATGGTCATATTTTCCGAGATCTTGTATTGGTCATTGTTACGCTCATTTTCTTTTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A098Z2X2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

99.515

100

0.995
  comM Streptococcus pneumoniae R6

99.515

100

0.995
  comM Streptococcus pneumoniae TIGR4

99.515

100

0.995
  comM Streptococcus mitis NCTC 12261

38.462

94.66

0.364
  comM Streptococcus mitis SK321

38.462

94.66

0.364

Multiple sequence alignment