Detailed information NTG1061401

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: ACGB44_RS13525
• Genome accession: NZ_CP171478
• Coordinates: 2866378..2868603 (-)
• Length: 741 a.a.
• NCBI ID: WP_394374682.1
• Uniprot ID: -
• Organism: Stutzerimonas frequens strain RL-XB02
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2861378..2873603

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACGB44_RS13490 (ACGB44_13490)	murB	2861768..2862787 (-)	1020	WP_230726394.1	UDP-N-acetylmuramate dehydrogenase	-
ACGB44_RS13495 (ACGB44_13495)	-	2862784..2863251 (-)	468	WP_156243758.1	low molecular weight protein-tyrosine-phosphatase	-
ACGB44_RS13500 (ACGB44_13500)	kdsB	2863253..2864017 (-)	765	WP_394374680.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACGB44_RS13505 (ACGB44_13505)	-	2864014..2864199 (-)	186	WP_011913743.1	Trm112 family protein	-
ACGB44_RS13510 (ACGB44_13510)	lpxK	2864245..2865249 (-)	1005	WP_394374681.1	tetraacyldisaccharide 4'-kinase	-
ACGB44_RS13515 (ACGB44_13515)	-	2865249..2865677 (-)	429	WP_063539898.1	biopolymer transporter ExbD	-
ACGB44_RS13520 (ACGB44_13520)	-	2865674..2866306 (-)	633	WP_063539899.1	MotA/TolQ/ExbB proton channel family protein	-
ACGB44_RS13525 (ACGB44_13525)	comA	2866378..2868603 (-)	2226	WP_394374682.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ACGB44_RS13530 (ACGB44_13530)	-	2868750..2869265 (+)	516	WP_063539900.1	DUF2062 domain-containing protein	-
ACGB44_RS13535 (ACGB44_13535)	-	2869278..2870522 (-)	1245	WP_394375973.1	lipoprotein-releasing ABC transporter permease subunit	-
ACGB44_RS13540 (ACGB44_13540)	lolD	2870522..2871211 (-)	690	WP_063539901.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
ACGB44_RS13545 (ACGB44_13545)	-	2871219..2872466 (-)	1248	WP_102840158.1	lipoprotein-releasing ABC transporter permease subunit	-
ACGB44_RS13550 (ACGB44_13550)	-	2872500..2873135 (+)	636	WP_110776484.1	PilZ domain-containing protein	-
ACGB44_RS13555 (ACGB44_13555)	-	2873139..2873447 (+)	309	WP_110776483.1	phosphodiesterase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80719.17 Da
• Isoelectric Point: 9.9921

>NTDB_id=1061401 ACGB44_RS13525 WP_394374682.1 2866378..2868603(-) (comA) [Stutzerimonas frequens strain RL-XB02]
MRTWMLALAAGLVLPRFLPALPAQWFCAALAAVGLLLLLRVRLVAPGLFLLGLSWACYQSQSAIDDRLPASMDGRTFWIE
GRVVGLPSRIGNVVRFELDDIQSRHAGLPSTVRLSWYDGPLLQAGERWRLAARLKRPHGMVNPHSFDYEAWLLARRIGAT
GTIKAGERLKASRASDGWRDRLRARLMAVPASDRQGAIAALVVGDDSGLSRGDWQVLQDTGTVHLMVISGQHIGMLAGLL
YGLVALLARLGAWPRRLPWLPWACGLALSGALAYGWLAGFEVPVRRACLMVTVVLVWRLRFRHLGVWLPLLLALDGVLLI
DPLVTLQPGFWLSFGAVAVLALAFSGRLGSWRWWKALTRAQWAATLGLLPLLLALGLPISASGPLANLLAVPWVSLTVPF
ALLGTLLLPLGGAGEALLSMVGFSLALLFDVLAAIASWQPAWIAVGLPVWALALIGLGVLLLLLPAGIPLRSLGFVLLLP
LAFPPRVEVPEGRAQVWVLDVGQGLAVLVRTREHALLYDAGPKQGEFDTGERVVVPSLRTLGASRLDLLLLSHADNDHSG
GAEAVQRLLRVERVVSGEPSRHAPDLGAEPCESRSTWQWNDVRFSLWQSQAAQDSNQQSCVLQIEANGERILLTGDIDQS
AEQAWLASEQQMSSHWLLLPHHGSRSSSSEPFLRGVAAQAALISRSLHNPFGHPHPSVTARLEAFDIKAYDTALHGAIRI
DLGGFSPPELQRSQRRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=1061401 ACGB44_RS13525 WP_394374682.1 2866378..2868603(-) (comA) [Stutzerimonas frequens strain RL-XB02]
ATGCGCACATGGATGCTTGCGCTCGCCGCGGGCCTGGTCCTGCCACGCTTCCTTCCAGCCTTGCCCGCTCAGTGGTTCTG
TGCGGCGCTGGCTGCTGTCGGACTGTTGCTGCTGCTGCGCGTCCGCTTGGTGGCGCCAGGCCTGTTTCTGCTGGGCTTGA
GCTGGGCCTGCTACCAGAGCCAGAGCGCCATCGACGACCGCTTGCCAGCGTCCATGGACGGTCGCACGTTCTGGATCGAG
GGGCGGGTAGTGGGGTTGCCCAGCCGTATCGGCAATGTGGTGCGCTTCGAGCTCGACGACATCCAATCGCGCCATGCCGG
GTTGCCGTCGACGGTGCGGCTGTCCTGGTATGACGGTCCGCTGCTGCAAGCCGGGGAGCGCTGGCGGCTGGCGGCGCGAC
TGAAACGGCCACATGGCATGGTCAACCCGCATTCCTTCGATTACGAAGCCTGGTTGCTCGCGCGACGTATCGGCGCCACC
GGCACGATCAAGGCGGGTGAGCGCCTGAAGGCGTCGAGGGCAAGCGACGGATGGCGCGATCGGCTTCGGGCGCGGCTCAT
GGCCGTTCCGGCATCCGATCGGCAGGGCGCCATCGCGGCGCTGGTGGTGGGTGACGATTCCGGTTTGAGCCGCGGCGACT
GGCAGGTGCTGCAGGACACCGGCACCGTCCACCTGATGGTCATCTCCGGGCAGCACATCGGCATGTTGGCGGGGCTGCTC
TATGGTCTGGTCGCATTGCTGGCTCGCCTGGGTGCGTGGCCGCGGCGGTTGCCATGGTTGCCCTGGGCGTGCGGGCTGGC
GTTAAGCGGTGCGCTGGCCTATGGCTGGCTGGCCGGTTTCGAGGTGCCGGTGCGTCGTGCCTGCCTGATGGTGACGGTGG
TGCTTGTCTGGCGGTTGCGCTTTCGCCATCTGGGCGTCTGGTTGCCGCTGCTACTGGCGCTCGATGGCGTCCTGCTGATC
GATCCCCTGGTGACATTGCAGCCCGGGTTCTGGCTGTCGTTTGGAGCGGTGGCGGTTCTTGCATTGGCGTTCTCGGGGCG
GCTCGGTTCATGGCGCTGGTGGAAGGCCCTGACCCGGGCGCAGTGGGCGGCGACCCTCGGCCTGCTTCCGCTGTTGCTCG
CCCTGGGGCTGCCGATAAGCGCGAGCGGGCCGCTGGCCAATCTGCTTGCCGTGCCTTGGGTGAGTCTCACCGTGCCCTTT
GCGTTGCTTGGTACGCTGCTGCTGCCGCTGGGCGGGGCTGGCGAAGCGTTGCTGTCGATGGTGGGCTTTTCGCTGGCACT
ACTTTTCGATGTGCTGGCAGCGATTGCGTCGTGGCAACCCGCCTGGATTGCGGTCGGCCTGCCCGTATGGGCTCTGGCGT
TAATCGGGCTGGGCGTCCTGTTGCTGTTGCTGCCAGCCGGTATTCCGCTGCGTTCGCTGGGCTTTGTGCTGCTGTTGCCG
CTGGCATTCCCGCCTCGTGTCGAGGTCCCGGAGGGCCGAGCGCAGGTCTGGGTGCTGGATGTGGGCCAGGGCCTGGCGGT
GCTGGTGCGCACCCGCGAGCATGCACTGCTTTACGATGCCGGGCCGAAACAGGGCGAGTTCGACACGGGCGAGCGGGTGG
TGGTCCCATCGCTCCGGACTCTTGGCGCGAGCCGGTTGGACCTGCTGTTGCTTAGCCATGCCGATAATGATCATTCGGGC
GGTGCGGAGGCGGTCCAGCGGCTGCTCCGGGTCGAGCGGGTGGTCAGTGGCGAGCCGTCTCGCCACGCGCCGGATCTGGG
CGCCGAACCTTGCGAAAGCCGCAGCACTTGGCAATGGAACGATGTGCGCTTCAGTCTGTGGCAATCGCAGGCGGCGCAGG
ACAGCAACCAGCAGTCCTGCGTGCTGCAGATCGAGGCCAACGGTGAGCGAATCCTGCTCACCGGTGACATTGACCAGTCC
GCCGAGCAGGCTTGGCTGGCAAGTGAGCAGCAGATGTCATCGCACTGGCTGCTGCTGCCCCATCACGGCAGCCGCAGCTC
CTCGTCGGAGCCGTTTCTGCGTGGCGTGGCCGCGCAAGCCGCGCTGATCTCGCGAAGTCTGCACAATCCGTTCGGCCACC
CGCACCCGAGCGTGACCGCGCGGCTCGAGGCGTTCGATATCAAGGCCTACGACACCGCGTTGCATGGCGCCATCCGGATC
GATCTGGGCGGTTTTTCGCCGCCAGAGTTGCAACGCTCGCAGCGACGATTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-653)

• Competence protein (Competence) (201-464)

• Domain of unknown function (DUF4131) (DUF4131) (23-168)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	66.154	96.491	0.638
comA	Ralstonia pseudosolanacearum GMI1000	36.328	100	0.377