Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | ACGTHP_RS08695 | Genome accession | NZ_CP171396 |
| Coordinates | 1881692..1882165 (+) | Length | 157 a.a. |
| NCBI ID | WP_001214067.1 | Uniprot ID | A0A7U3Y304 |
| Organism | Acinetobacter baumannii strain T14 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1876692..1887165
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACGTHP_RS08670 (ACGTHP_08670) | - | 1877155..1879260 (-) | 2106 | WP_001117590.1 | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | - |
| ACGTHP_RS08675 (ACGTHP_08675) | - | 1879300..1879430 (-) | 131 | Protein_1709 | hypothetical protein | - |
| ACGTHP_RS08680 (ACGTHP_08680) | rpoZ | 1879469..1879747 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| ACGTHP_RS08685 (ACGTHP_08685) | gmk | 1879820..1880449 (-) | 630 | WP_000015937.1 | guanylate kinase | - |
| ACGTHP_RS08690 (ACGTHP_08690) | ispH | 1880572..1881522 (+) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| ACGTHP_RS08695 (ACGTHP_08695) | fimU | 1881692..1882165 (+) | 474 | WP_001214067.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| ACGTHP_RS08700 (ACGTHP_08700) | pilV | 1882159..1882719 (+) | 561 | WP_002194578.1 | type IV pilus modification protein PilV | Machinery gene |
| ACGTHP_RS08705 (ACGTHP_08705) | pilW | 1882720..1883721 (+) | 1002 | WP_023896140.1 | PilW family protein | Machinery gene |
| ACGTHP_RS08710 (ACGTHP_08710) | pilX | 1883718..1884536 (+) | 819 | WP_000149377.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16823.40 Da Isoelectric Point: 8.5355
>NTDB_id=1061089 ACGTHP_RS08695 WP_001214067.1 1881692..1882165(+) (fimU) [Acinetobacter baumannii strain T14]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDGNQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDGNQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=1061089 ACGTHP_RS08695 WP_001214067.1 1881692..1882165(+) (fimU) [Acinetobacter baumannii strain T14]
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCAGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGGTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCAGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGGTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
99.363 |
100 |
0.994 |