Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACGTJS_RS01525 Genome accession   NZ_CP171363
Coordinates   306480..306863 (-) Length   127 a.a.
NCBI ID   WP_315041228.1    Uniprot ID   -
Organism   Faucicola mancuniensis strain GVCNT2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 301480..311863
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGTJS_RS01505 (ACGTJS_01505) - 302239..303096 (-) 858 WP_410472606.1 CheR family methyltransferase -
  ACGTJS_RS01510 (ACGTJS_01510) - 303216..304250 (-) 1035 Protein_291 methyl-accepting chemotaxis protein -
  ACGTJS_RS01515 (ACGTJS_01515) - 305400..305930 (-) 531 WP_410472607.1 chemotaxis protein CheW -
  ACGTJS_RS01520 (ACGTJS_01520) - 305935..306297 (-) 363 WP_315041225.1 PleD family two-component system response regulator -
  ACGTJS_RS01525 (ACGTJS_01525) pilG 306480..306863 (-) 384 WP_315041228.1 twitching motility response regulator PilG Regulator
  ACGTJS_RS01530 (ACGTJS_01530) - 307209..308450 (+) 1242 WP_410472608.1 efflux RND transporter periplasmic adaptor subunit -
  ACGTJS_RS01535 (ACGTJS_01535) - 308492..311644 (+) 3153 WP_410472609.1 efflux RND transporter permease subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14082.18 Da        Isoelectric Point: 4.7213

>NTDB_id=1060908 ACGTJS_RS01525 WP_315041228.1 306480..306863(-) (pilG) [Faucicola mancuniensis strain GVCNT2]
MDANFDGLKVMIIDDSKTIRRTAETLLEKAGCQVVTAVDGFDALAKIADSNPDVIFVDIMMPRLDGYQTCALIKNNADFA
NKPVIMLSSKDGLFDKARGRIVGSDEYLTKPFSKEELFDAINRYRPA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=1060908 ACGTJS_RS01525 WP_315041228.1 306480..306863(-) (pilG) [Faucicola mancuniensis strain GVCNT2]
ATGGATGCAAACTTTGATGGTTTAAAAGTCATGATTATTGATGACTCAAAAACGATTCGCCGTACAGCCGAAACATTATT
AGAAAAAGCAGGCTGTCAAGTGGTAACGGCTGTTGATGGTTTTGACGCACTTGCAAAAATCGCAGATTCAAACCCTGACG
TGATTTTTGTGGATATTATGATGCCACGCCTTGACGGTTATCAAACCTGTGCTTTGATTAAAAACAATGCCGATTTTGCG
AACAAGCCTGTGATTATGTTGTCATCAAAAGATGGCTTATTTGACAAAGCCCGTGGACGTATTGTGGGTTCAGATGAATA
TTTGACAAAACCGTTTAGCAAAGAAGAACTGTTTGACGCAATCAATCGTTATCGCCCAGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.194

97.638

0.724
  vicR Streptococcus mutans UA159

43.636

86.614

0.378
  pilH Synechocystis sp. PCC 6803

40.351

89.764

0.362

Multiple sequence alignment