Detailed information NTG1060323

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: ACF8MK_RS01340
• Genome accession: NZ_CP171154
• Coordinates: 341797..342870 (-)
• Length: 357 a.a.
• NCBI ID: WP_392537864.1
• Uniprot ID: -
• Organism: Legionella sp. 227
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 336797..347870

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACF8MK_RS01325 (ACF8MK_01325)	-	338628..338858 (+)	231	WP_265704286.1	hypothetical protein	-
ACF8MK_RS01330 (ACF8MK_01330)	topA	338942..341227 (-)	2286	WP_392537862.1	type I DNA topoisomerase	-
ACF8MK_RS01335 (ACF8MK_01335)	-	341359..341793 (-)	435	WP_392537863.1	DUF494 family protein	-
ACF8MK_RS01340 (ACF8MK_01340)	dprA	341797..342870 (-)	1074	WP_392537864.1	DNA-processing protein DprA	Machinery gene
ACF8MK_RS01345 (ACF8MK_01345)	-	342867..343904 (-)	1038	WP_265704282.1	LysM peptidoglycan-binding domain-containing protein	-
ACF8MK_RS01350 (ACF8MK_01350)	def	344050..344562 (+)	513	WP_392537865.1	peptide deformylase	-
ACF8MK_RS01355 (ACF8MK_01355)	fmt	344728..345669 (+)	942	WP_392537866.1	methionyl-tRNA formyltransferase	-
ACF8MK_RS01360 (ACF8MK_01360)	rsmB	345669..346952 (+)	1284	WP_392537867.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
ACF8MK_RS01365 (ACF8MK_01365)	-	346949..347704 (+)	756	WP_392537868.1	CPBP family intramembrane glutamate endopeptidase	-

Sequence

Protein

• Length: 357 a.a.
• Molecular weight: 38904.85 Da
• Isoelectric Point: 6.5813

>NTDB_id=1060323 ACF8MK_RS01340 WP_392537864.1 341797..342870(-) (dprA) [Legionella sp. 227]
MNNLSYYLALNRMERVGPRTVATLQKRWPDLQQMFQLSATELEEAGLSPTLAQTIAGFDLHLIQEDLRWLEAADTHHILT
WDSPDYPSLLKEIIDPPIVLYVKGQLACLKQPQLAVVGSRNPTITGRENARQFAKSIAAHGVTIVSGLALGIDAEAHEGC
LEAGGQTIAVLGTGIDRIYPYRHQALAQKIEQSGLLMSEFPLKSPPTAGHFPRRNRIISGLSLCTLVVESAIKSGSLITA
RMALEQNRDVLAIPGSIHNPLARGCHYLLQQGAKLVTSVADVLEELRIDSEQQTTDKAILPLASGNKNLVKFIGFEMTTV
DQIILRSGCTVEQVTSELAKLELNGAVVSVPGGYMRC

Nucleotide

• Length: 1074 bp

>NTDB_id=1060323 ACF8MK_RS01340 WP_392537864.1 341797..342870(-) (dprA) [Legionella sp. 227]
ATGAATAATTTATCGTACTACCTCGCATTAAACCGAATGGAAAGGGTGGGTCCGCGTACGGTTGCAACATTGCAAAAACG
CTGGCCTGATCTGCAACAAATGTTCCAACTCTCAGCAACAGAGCTTGAAGAAGCGGGACTATCACCTACTTTGGCACAAA
CCATAGCGGGTTTTGATTTGCATTTGATTCAAGAAGATCTCAGATGGCTTGAGGCTGCTGATACACATCATATACTGACT
TGGGATTCGCCTGACTATCCTTCTTTATTGAAGGAAATTATCGATCCTCCTATTGTTTTGTACGTAAAAGGACAGCTTGC
CTGCTTAAAGCAACCGCAATTAGCTGTGGTAGGCAGCCGTAATCCAACAATAACTGGCAGAGAAAATGCCCGCCAATTTG
CAAAATCTATCGCCGCCCATGGAGTGACCATTGTCAGTGGTTTGGCTTTAGGAATTGATGCTGAAGCTCATGAAGGATGT
TTGGAGGCCGGAGGACAGACAATAGCTGTTTTGGGGACCGGAATTGATCGGATTTATCCTTACCGACACCAGGCACTTGC
GCAAAAAATTGAGCAAAGCGGGCTATTAATGAGCGAATTCCCTCTAAAAAGTCCTCCGACTGCTGGACATTTCCCACGAA
GAAATCGTATAATAAGTGGTTTATCATTGTGCACTTTGGTTGTTGAGTCAGCAATAAAGAGTGGTTCGTTAATCACAGCA
CGAATGGCCCTGGAACAAAATCGAGATGTTTTGGCAATCCCTGGTTCCATTCATAACCCCCTGGCTCGAGGGTGTCATTA
CCTGTTGCAGCAAGGAGCTAAATTAGTCACTTCAGTTGCCGATGTTCTTGAAGAGTTACGGATTGATTCAGAACAGCAAA
CAACTGATAAAGCGATTTTACCTCTTGCCAGCGGGAATAAAAACCTAGTAAAGTTCATTGGCTTTGAAATGACAACTGTT
GATCAGATCATTTTACGTAGTGGATGCACCGTTGAGCAAGTCACTAGTGAGCTTGCAAAATTAGAATTAAATGGGGCTGT
TGTATCTGTGCCCGGTGGCTATATGAGGTGTTAG

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (300-353)

• DNA recombination-mediator protein A (DNA_processg_A) (75-277)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Legionella pneumophila strain ERS1305867	73.389	100	0.734
dprA	Vibrio campbellii strain DS40M4	43.562	100	0.445
dprA	Vibrio cholerae strain A1552	42.35	100	0.434
dprA	Glaesserella parasuis strain SC1401	40	100	0.42