Detailed information    

insolico Bioinformatically predicted

Overview


Name   comK/comK1   Type   Regulator
Locus tag   ACF3N8_RS10735 Genome accession   NZ_CP171119
Coordinates   2234373..2234927 (-) Length   184 a.a.
NCBI ID   WP_009383578.1    Uniprot ID   K9ALF0
Organism   Staphylococcus massiliensis strain WGS1515     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2229373..2239927
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF3N8_RS10710 (ACF3N8_10710) - 2230167..2230370 (+) 204 WP_009383737.1 TM2 domain-containing protein -
  ACF3N8_RS10715 (ACF3N8_10715) - 2230413..2232398 (-) 1986 WP_327078782.1 acyltransferase -
  ACF3N8_RS10720 (ACF3N8_10720) - 2232567..2233901 (+) 1335 WP_103370597.1 IS1182 family transposase -
  ACF3N8_RS10735 (ACF3N8_10735) comK/comK1 2234373..2234927 (-) 555 WP_009383578.1 competence protein ComK Regulator
  ACF3N8_RS10740 (ACF3N8_10740) - 2235146..2235364 (+) 219 WP_009383577.1 IDEAL domain-containing protein -
  ACF3N8_RS10745 (ACF3N8_10745) - 2235435..2236421 (-) 987 WP_009383576.1 lipoate--protein ligase -
  ACF3N8_RS10750 (ACF3N8_10750) - 2236613..2236798 (+) 186 WP_009383575.1 YkvS family protein -
  ACF3N8_RS10755 (ACF3N8_10755) - 2236803..2237408 (+) 606 WP_009383574.1 type II CAAX prenyl endopeptidase Rce1 family protein -
  ACF3N8_RS10760 (ACF3N8_10760) - 2237773..2239251 (-) 1479 WP_017176617.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -

Sequence


Protein


Download         Length: 184 a.a.        Molecular weight: 21998.34 Da        Isoelectric Point: 9.5885

>NTDB_id=1060243 ACF3N8_RS10735 WP_009383578.1 2234373..2234927(-) (comK/comK1) [Staphylococcus massiliensis strain WGS1515]
MGYIIRRGDMVVRPVFIGHIPSHQTEVMRYSKHHEIVDSRVRRIIERSCKFYGDTYLGRKMQTKRLTEISNKTPILLTPL
FPTYFFPTHSDRSFENTWINIHYLEDIKPLKGAKCKVYFSNLESINVNISYHSMRHQYMNCIYYYYLMDKHARLLKNDPD
NSIDYSKSQLNLFEALTHYSILQS

Nucleotide


Download         Length: 555 bp        

>NTDB_id=1060243 ACF3N8_RS10735 WP_009383578.1 2234373..2234927(-) (comK/comK1) [Staphylococcus massiliensis strain WGS1515]
ATGGGCTATATTATTCGGCGTGGGGATATGGTTGTACGGCCAGTGTTTATCGGGCATATACCAAGTCATCAAACAGAAGT
GATGCGCTACTCTAAGCACCATGAAATCGTTGATTCGAGAGTGAGACGTATTATTGAACGATCGTGCAAATTTTATGGTG
ACACATATCTAGGTCGTAAAATGCAGACGAAACGGCTCACTGAAATTTCGAACAAAACCCCAATCTTATTAACGCCATTA
TTTCCTACTTATTTCTTTCCTACACATTCAGACCGCTCATTTGAAAACACATGGATTAATATCCATTATCTCGAAGACAT
TAAGCCATTAAAAGGGGCTAAATGCAAAGTTTACTTCTCAAATTTAGAATCAATCAATGTTAATATTTCGTATCATAGCA
TGAGACATCAGTACATGAACTGTATCTATTACTACTATTTAATGGATAAACATGCGAGATTATTGAAGAACGATCCTGAT
AACTCGATTGATTACTCCAAATCACAACTCAATTTATTTGAAGCGTTGACGCATTATTCCATCTTACAATCTTAA

Domains


Predicted by InterproScan.

(3-151)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB K9ALF0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

57.459

98.37

0.565

  comK/comK1 Staphylococcus aureus N315

57.459

98.37

0.565


Multiple sequence alignment