Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AAA985_RS00395 | Genome accession | NZ_AP028603 |
| Coordinates | 64382..64957 (+) | Length | 191 a.a. |
| NCBI ID | WP_050149695.1 | Uniprot ID | A0A4H9FLJ4 |
| Organism | Streptococcus pneumoniae strain Pne2 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 59382..69957
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAA985_RS00350 (TKY181970_00640) | - | 59685..59870 (+) | 186 | WP_000638668.1 | helix-turn-helix transcriptional regulator | - |
| AAA985_RS00355 (TKY181970_00650) | - | 59872..60588 (+) | 717 | WP_001004042.1 | phage antirepressor KilAC domain-containing protein | - |
| AAA985_RS00360 (TKY181970_00660) | - | 60635..60901 (+) | 267 | WP_001865194.1 | hypothetical protein | - |
| AAA985_RS00365 (TKY181970_00680) | - | 61246..61512 (+) | 267 | WP_000989839.1 | Rrf2 family transcriptional regulator | - |
| AAA985_RS00370 (TKY181970_00690) | - | 61744..62010 (+) | 267 | WP_000450965.1 | hypothetical protein | - |
| AAA985_RS00375 (TKY181970_00700) | - | 62094..62546 (+) | 453 | WP_055310816.1 | hypothetical protein | - |
| AAA985_RS00380 (TKY181970_00710) | - | 62552..63199 (+) | 648 | WP_023396071.1 | ERF family protein | - |
| AAA985_RS00385 (TKY181970_00720) | - | 63202..64194 (+) | 993 | WP_075223585.1 | DUF1351 domain-containing protein | - |
| AAA985_RS00390 (TKY181970_00730) | - | 64216..64392 (+) | 177 | WP_001203349.1 | hypothetical protein | - |
| AAA985_RS00395 (TKY181970_00740) | ssb | 64382..64957 (+) | 576 | WP_050149695.1 | single-stranded DNA-binding protein | Machinery gene |
| AAA985_RS00400 (TKY181970_00750) | - | 64971..65291 (+) | 321 | WP_224757151.1 | hypothetical protein | - |
| AAA985_RS00405 (TKY181970_00760) | - | 65306..65509 (+) | 204 | WP_000161126.1 | hypothetical protein | - |
| AAA985_RS00410 (TKY181970_00770) | - | 65537..65716 (+) | 180 | Protein_74 | hypothetical protein | - |
| AAA985_RS00415 (TKY181970_00780) | - | 65733..65945 (+) | 213 | WP_001286809.1 | hypothetical protein | - |
| AAA985_RS00420 (TKY181970_00790) | - | 65956..66357 (+) | 402 | WP_000667209.1 | hypothetical protein | - |
| AAA985_RS00425 (TKY181970_00800) | - | 66359..66565 (+) | 207 | WP_075223584.1 | hypothetical protein | - |
| AAA985_RS00430 (TKY181970_00810) | - | 66614..66931 (+) | 318 | WP_000969685.1 | hypothetical protein | - |
| AAA985_RS00435 (TKY181970_00820) | - | 66933..67448 (+) | 516 | WP_001021768.1 | DUF1642 domain-containing protein | - |
| AAA985_RS00440 (TKY181970_00830) | - | 67449..67661 (+) | 213 | WP_000160161.1 | hypothetical protein | - |
| AAA985_RS00445 (TKY181970_00840) | - | 67658..68029 (+) | 372 | WP_001247149.1 | hypothetical protein | - |
| AAA985_RS00450 (TKY181970_00850) | - | 68050..68343 (+) | 294 | WP_000194856.1 | hypothetical protein | - |
| AAA985_RS00455 (TKY181970_00860) | - | 68343..68735 (+) | 393 | WP_000162611.1 | hypothetical protein | - |
| AAA985_RS00460 (TKY181970_00870) | - | 68801..69895 (+) | 1095 | WP_000425573.1 | DUF4417 domain-containing protein | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21306.07 Da Isoelectric Point: 5.1785
>NTDB_id=105938 AAA985_RS00395 WP_050149695.1 64382..64957(+) (ssb) [Streptococcus pneumoniae strain Pne2]
MINNVVLVGRLTRDAELRYTQSNIAVATFTLAVNRPFKNEAGEREADFINCVIWRQLAENLANWAKKGSLIGVTGVIQTR
SYDNQQGQRVYVTEVVASNFQLLESRNSQQNNQGHQDHHGGYQQQGYSNQGSSFQNGNNQGNNFQNGNSYGQQGSSFEGN
TTNLVPDFTRDNNPFGRPTNPLDISDDDLPF
MINNVVLVGRLTRDAELRYTQSNIAVATFTLAVNRPFKNEAGEREADFINCVIWRQLAENLANWAKKGSLIGVTGVIQTR
SYDNQQGQRVYVTEVVASNFQLLESRNSQQNNQGHQDHHGGYQQQGYSNQGSSFQNGNNQGNNFQNGNSYGQQGSSFEGN
TTNLVPDFTRDNNPFGRPTNPLDISDDDLPF
Nucleotide
Download Length: 576 bp
>NTDB_id=105938 AAA985_RS00395 WP_050149695.1 64382..64957(+) (ssb) [Streptococcus pneumoniae strain Pne2]
ATGATAAATAACGTTGTTTTAGTAGGGCGACTTACAAGAGATGCCGAACTGAGATACACGCAATCTAATATTGCGGTTGC
TACGTTTACTCTTGCTGTAAACCGTCCATTTAAGAACGAGGCTGGAGAGCGTGAGGCTGATTTTATCAATTGCGTTATCT
GGAGACAGTTAGCTGAAAATCTTGCTAATTGGGCTAAAAAAGGCTCTCTTATCGGAGTTACAGGAGTAATTCAAACACGT
AGCTATGATAACCAGCAAGGTCAACGTGTTTATGTCACAGAAGTTGTTGCCAGTAATTTTCAACTGTTGGAAAGTCGTAA
CAGTCAGCAAAATAATCAAGGTCATCAAGACCATCATGGCGGTTATCAGCAGCAGGGCTACAGTAATCAAGGCAGTTCTT
TCCAAAATGGAAATAACCAAGGGAACAATTTCCAAAATGGAAATAGTTACGGGCAACAAGGCAGTTCCTTTGAGGGGAAC
ACAACAAATCTAGTTCCTGATTTCACCCGTGATAACAATCCATTTGGCAGACCCACAAATCCATTGGATATTAGTGATGA
TGATTTACCGTTTTAG
ATGATAAATAACGTTGTTTTAGTAGGGCGACTTACAAGAGATGCCGAACTGAGATACACGCAATCTAATATTGCGGTTGC
TACGTTTACTCTTGCTGTAAACCGTCCATTTAAGAACGAGGCTGGAGAGCGTGAGGCTGATTTTATCAATTGCGTTATCT
GGAGACAGTTAGCTGAAAATCTTGCTAATTGGGCTAAAAAAGGCTCTCTTATCGGAGTTACAGGAGTAATTCAAACACGT
AGCTATGATAACCAGCAAGGTCAACGTGTTTATGTCACAGAAGTTGTTGCCAGTAATTTTCAACTGTTGGAAAGTCGTAA
CAGTCAGCAAAATAATCAAGGTCATCAAGACCATCATGGCGGTTATCAGCAGCAGGGCTACAGTAATCAAGGCAGTTCTT
TCCAAAATGGAAATAACCAAGGGAACAATTTCCAAAATGGAAATAGTTACGGGCAACAAGGCAGTTCCTTTGAGGGGAAC
ACAACAAATCTAGTTCCTGATTTCACCCGTGATAACAATCCATTTGGCAGACCCACAAATCCATTGGATATTAGTGATGA
TGATTTACCGTTTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.167 |
100 |
0.545 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
51.309 |
100 |
0.513 |