Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACFCQI_RS12100 Genome accession   NZ_CP170722
Coordinates   2708301..2708666 (+) Length   121 a.a.
NCBI ID   WP_395121350.1    Uniprot ID   A0AB74UVB4
Organism   Rhodanobacter sp. FW102-FHT14D06     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2703301..2713666
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFCQI_RS12075 (ACFCQI_12075) - 2704062..2704988 (-) 927 WP_395116999.1 aspartate carbamoyltransferase catalytic subunit -
  ACFCQI_RS12080 (ACFCQI_12080) ruvX 2705021..2705470 (-) 450 WP_395117001.1 Holliday junction resolvase RuvX -
  ACFCQI_RS12085 (ACFCQI_12085) - 2705467..2706036 (-) 570 WP_395117003.1 YqgE/AlgH family protein -
  ACFCQI_RS12090 (ACFCQI_12090) - 2706072..2706941 (-) 870 WP_395117005.1 energy transducer TonB -
  ACFCQI_RS12095 (ACFCQI_12095) gshB 2706938..2707915 (-) 978 WP_395117007.1 glutathione synthase -
  ACFCQI_RS12100 (ACFCQI_12100) pilG 2708301..2708666 (+) 366 WP_395121350.1 twitching motility response regulator PilG Regulator
  ACFCQI_RS12105 (ACFCQI_12105) - 2708689..2709060 (+) 372 WP_395117009.1 response regulator -
  ACFCQI_RS12110 (ACFCQI_12110) - 2709057..2709596 (+) 540 WP_395117011.1 chemotaxis protein CheW -
  ACFCQI_RS12115 (ACFCQI_12115) - 2709731..2711761 (+) 2031 WP_395117013.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 121 a.a.        Molecular weight: 13418.58 Da        Isoelectric Point: 7.8842

>NTDB_id=1058891 ACFCQI_RS12100 WP_395121350.1 2708301..2708666(+) (pilG) [Rhodanobacter sp. FW102-FHT14D06]
MVIDDSKTIRRTAETLLKKEGCEVLTAVDGFEALAKISDQKPAIIFVDIMMPRLDGYQTCALIKNNPEFRATPVIMLSSK
DGLFDKARGRIVGAEQYLTKPFTRDELLGAIHRHVSTAASH

Nucleotide


Download         Length: 366 bp        

>NTDB_id=1058891 ACFCQI_RS12100 WP_395121350.1 2708301..2708666(+) (pilG) [Rhodanobacter sp. FW102-FHT14D06]
ATGGTGATCGATGACTCCAAGACCATCCGCCGCACCGCCGAGACCCTGCTGAAGAAAGAGGGCTGCGAGGTGCTGACCGC
GGTCGACGGGTTCGAGGCGCTGGCCAAGATTTCCGACCAGAAGCCGGCGATCATCTTCGTCGACATCATGATGCCCCGCC
TCGACGGCTATCAGACCTGCGCCCTGATCAAGAACAACCCCGAGTTCCGCGCCACGCCCGTGATCATGCTCAGCTCCAAG
GACGGACTCTTCGACAAGGCGCGCGGCCGCATCGTCGGCGCCGAACAATACCTGACCAAGCCGTTCACCCGTGACGAGCT
GCTTGGCGCAATCCATCGACATGTCAGTACTGCAGCAAGTCACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.214

96.694

0.727
  vicR Streptococcus mutans UA159

40.87

95.041

0.388
  pilH Synechocystis sp. PCC 6803

40.708

93.388

0.38

Multiple sequence alignment