Detailed information
Bioinformatically predicted
Overview
| Name | ctsP | Type | Machinery gene |
| Locus tag | R8953_RS01570 | Genome accession | NZ_AP028409 |
| Coordinates | 311107..311703 (+) | Length | 198 a.a. |
| NCBI ID | WP_075489172.1 | Uniprot ID | - |
| Organism | Campylobacter coli strain IDH-11999 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 306107..316703
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8953_RS01560 (I11999_03030) | ctsR | 309407..309718 (+) | 312 | WP_002779316.1 | hypothetical protein | Machinery gene |
| R8953_RS01565 (I11999_03040) | ctsD | 309696..311114 (+) | 1419 | WP_317727609.1 | pilus (MSHA type) biogenesis protein MshL | Machinery gene |
| R8953_RS01570 (I11999_03050) | ctsP | 311107..311703 (+) | 597 | WP_075489172.1 | ATP-binding protein | Machinery gene |
| R8953_RS01575 (I11999_03060) | ctsX | 311700..312296 (+) | 597 | WP_317727610.1 | transformation system protein | Machinery gene |
| R8953_RS01580 (I11999_03070) | ctsE | 312289..313851 (+) | 1563 | WP_317727611.1 | GspE/PulE family protein | Machinery gene |
| R8953_RS01585 (I11999_03080) | ctsF | 313838..315016 (+) | 1179 | WP_317727612.1 | type II secretion system F family protein | Machinery gene |
| R8953_RS01590 (I11999_03090) | - | 315013..315777 (-) | 765 | WP_317727613.1 | TSUP family transporter | - |
| R8953_RS01595 (I11999_03100) | - | 315780..316544 (-) | 765 | WP_002781156.1 | TIGR02757 family protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 23568.45 Da Isoelectric Point: 9.7286
>NTDB_id=105589 R8953_RS01570 WP_075489172.1 311107..311703(+) (ctsP) [Campylobacter coli strain IDH-11999]
MNNIIAFRQECFNQINALLKNKALILLWGKSGSGKSVLLQRLALHHNEDFTNQIFTDEKDFHKFIQDKKRKIIILDEVGM
YNPDILELIRIYSDQMSFILSSHKKINLFEKEYFKSRFSAMFWLQKPDINELSSYIKMKFDQELSQKSLKFLMKIYQGNL
RYLDKILQSFCELNAYLNNNKSQDYILRLSALEQGFLK
MNNIIAFRQECFNQINALLKNKALILLWGKSGSGKSVLLQRLALHHNEDFTNQIFTDEKDFHKFIQDKKRKIIILDEVGM
YNPDILELIRIYSDQMSFILSSHKKINLFEKEYFKSRFSAMFWLQKPDINELSSYIKMKFDQELSQKSLKFLMKIYQGNL
RYLDKILQSFCELNAYLNNNKSQDYILRLSALEQGFLK
Nucleotide
Download Length: 597 bp
>NTDB_id=105589 R8953_RS01570 WP_075489172.1 311107..311703(+) (ctsP) [Campylobacter coli strain IDH-11999]
ATGAATAATATAATTGCTTTTAGACAAGAATGTTTTAATCAAATCAATGCCTTATTAAAGAACAAAGCTTTGATTTTACT
TTGGGGTAAAAGCGGTAGTGGGAAAAGTGTTTTATTGCAAAGACTTGCGTTGCATCATAATGAGGATTTTACTAATCAAA
TTTTTACAGATGAAAAAGATTTTCATAAATTTATACAAGATAAAAAACGAAAAATTATCATACTAGATGAAGTGGGGATG
TATAACCCTGATATATTAGAATTAATTCGGATTTATAGTGATCAAATGAGTTTTATACTTAGCTCACATAAAAAAATCAA
TCTTTTTGAAAAGGAGTATTTTAAAAGTCGTTTTAGTGCTATGTTTTGGCTTCAAAAGCCTGATATAAATGAATTAAGCA
GTTATATTAAAATGAAATTTGATCAAGAGCTTTCTCAAAAGTCTTTAAAATTTCTTATGAAAATTTATCAAGGCAATTTA
AGATATTTAGACAAAATACTTCAAAGTTTTTGCGAGTTAAACGCTTATTTAAACAACAACAAAAGTCAAGATTATATTTT
GAGACTAAGCGCGTTAGAGCAGGGGTTTTTAAAATGA
ATGAATAATATAATTGCTTTTAGACAAGAATGTTTTAATCAAATCAATGCCTTATTAAAGAACAAAGCTTTGATTTTACT
TTGGGGTAAAAGCGGTAGTGGGAAAAGTGTTTTATTGCAAAGACTTGCGTTGCATCATAATGAGGATTTTACTAATCAAA
TTTTTACAGATGAAAAAGATTTTCATAAATTTATACAAGATAAAAAACGAAAAATTATCATACTAGATGAAGTGGGGATG
TATAACCCTGATATATTAGAATTAATTCGGATTTATAGTGATCAAATGAGTTTTATACTTAGCTCACATAAAAAAATCAA
TCTTTTTGAAAAGGAGTATTTTAAAAGTCGTTTTAGTGCTATGTTTTGGCTTCAAAAGCCTGATATAAATGAATTAAGCA
GTTATATTAAAATGAAATTTGATCAAGAGCTTTCTCAAAAGTCTTTAAAATTTCTTATGAAAATTTATCAAGGCAATTTA
AGATATTTAGACAAAATACTTCAAAGTTTTTGCGAGTTAAACGCTTATTTAAACAACAACAAAAGTCAAGATTATATTTT
GAGACTAAGCGCGTTAGAGCAGGGGTTTTTAAAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsP | Campylobacter jejuni subsp. jejuni 81-176 |
57.921 |
100 |
0.591 |