Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACE8TD_RS00040 | Genome accession | NZ_CP170116 |
| Coordinates | 9433..9945 (+) | Length | 170 a.a. |
| NCBI ID | WP_010720497.1 | Uniprot ID | A0A1V8XB86 |
| Organism | Enterococcus hirae strain 323p | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 4433..14945
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACE8TD_RS00030 (ACE8TD_00030) | gyrA | 6184..8682 (+) | 2499 | WP_010720499.1 | DNA gyrase subunit A | - |
| ACE8TD_RS00035 (ACE8TD_00035) | rpsF | 9082..9381 (+) | 300 | WP_010720498.1 | 30S ribosomal protein S6 | - |
| ACE8TD_RS00040 (ACE8TD_00040) | ssb | 9433..9945 (+) | 513 | WP_010720497.1 | single-stranded DNA-binding protein | Machinery gene |
| ACE8TD_RS00045 (ACE8TD_00045) | rpsR | 9971..10207 (+) | 237 | WP_002288370.1 | 30S ribosomal protein S18 | - |
| ACE8TD_RS00050 (ACE8TD_00050) | - | 10355..10762 (-) | 408 | WP_010736777.1 | hypothetical protein | - |
| ACE8TD_RS00055 (ACE8TD_00055) | - | 11001..12974 (+) | 1974 | WP_135981954.1 | DHH family phosphoesterase | - |
| ACE8TD_RS00060 (ACE8TD_00060) | rplI | 12980..13432 (+) | 453 | WP_010720494.1 | 50S ribosomal protein L9 | - |
| ACE8TD_RS00065 (ACE8TD_00065) | - | 13825..14316 (-) | 492 | WP_034867241.1 | glycine zipper family protein | - |
| ACE8TD_RS00070 (ACE8TD_00070) | - | 14365..14487 (-) | 123 | WP_014834375.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 170 a.a. Molecular weight: 18703.22 Da Isoelectric Point: 4.5567
>NTDB_id=1055152 ACE8TD_RS00040 WP_010720497.1 9433..9945(+) (ssb) [Enterococcus hirae strain 323p]
MINNVVLVGRLTKDPDLRYTSSGTAVATFTLAVNRNFTSQNGNREADFINCVIWRKSAETLANYARKGTLLGVTGRIQTR
SYDNQQGQRVYVTEVVAENFQLLESRAASENRQQTGGYQSSGQSTNDFGGSNNYNQTSQSSNGMPDFDRDNSDPFGSSST
IDISDDDLPF
MINNVVLVGRLTKDPDLRYTSSGTAVATFTLAVNRNFTSQNGNREADFINCVIWRKSAETLANYARKGTLLGVTGRIQTR
SYDNQQGQRVYVTEVVAENFQLLESRAASENRQQTGGYQSSGQSTNDFGGSNNYNQTSQSSNGMPDFDRDNSDPFGSSST
IDISDDDLPF
Nucleotide
Download Length: 513 bp
>NTDB_id=1055152 ACE8TD_RS00040 WP_010720497.1 9433..9945(+) (ssb) [Enterococcus hirae strain 323p]
TTGATTAATAATGTTGTACTAGTTGGACGTCTAACTAAAGATCCGGATTTACGATATACATCAAGTGGCACTGCAGTAGC
AACGTTTACTTTAGCTGTTAATCGTAATTTTACTAGCCAAAACGGCAATCGTGAGGCTGACTTTATTAATTGTGTGATTT
GGCGTAAATCAGCAGAGACATTAGCAAACTATGCTCGTAAGGGGACTCTTTTAGGAGTTACTGGACGTATCCAAACTCGT
TCTTATGATAATCAGCAAGGACAACGTGTATACGTAACAGAAGTAGTTGCTGAAAACTTCCAATTATTGGAAAGTCGTGC
TGCATCTGAAAATCGTCAACAAACTGGCGGTTACCAAAGCTCTGGTCAATCGACAAATGATTTTGGCGGAAGTAATAACT
ATAATCAAACATCTCAATCATCCAACGGTATGCCTGATTTTGATCGTGACAATTCTGATCCATTTGGTTCAAGTTCAACG
ATCGACATTTCAGACGATGATTTACCATTCTAA
TTGATTAATAATGTTGTACTAGTTGGACGTCTAACTAAAGATCCGGATTTACGATATACATCAAGTGGCACTGCAGTAGC
AACGTTTACTTTAGCTGTTAATCGTAATTTTACTAGCCAAAACGGCAATCGTGAGGCTGACTTTATTAATTGTGTGATTT
GGCGTAAATCAGCAGAGACATTAGCAAACTATGCTCGTAAGGGGACTCTTTTAGGAGTTACTGGACGTATCCAAACTCGT
TCTTATGATAATCAGCAAGGACAACGTGTATACGTAACAGAAGTAGTTGCTGAAAACTTCCAATTATTGGAAAGTCGTGC
TGCATCTGAAAATCGTCAACAAACTGGCGGTTACCAAAGCTCTGGTCAATCGACAAATGATTTTGGCGGAAGTAATAACT
ATAATCAAACATCTCAATCATCCAACGGTATGCCTGATTTTGATCGTGACAATTCTGATCCATTTGGTTCAAGTTCAACG
ATCGACATTTCAGACGATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
61.628 |
100 |
0.624 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
57.542 |
100 |
0.606 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
60.377 |
62.353 |
0.376 |