Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | BCV31_RS07775 | Genome accession | NZ_CP169999 |
| Coordinates | 1753126..1753755 (-) | Length | 209 a.a. |
| NCBI ID | WP_010435284.1 | Uniprot ID | A0AAN0LMD0 |
| Organism | Vibrio cyclitrophicus strain 10N.286.55.C10 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1748126..1758755
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BCV31_RS07755 (BCV31_07755) | aroB | 1749062..1750150 (-) | 1089 | WP_010435273.1 | 3-dehydroquinate synthase | - |
| BCV31_RS07760 (BCV31_07760) | aroK | 1750175..1750693 (-) | 519 | WP_009848907.1 | shikimate kinase AroK | - |
| BCV31_RS07765 (BCV31_07765) | pilQ | 1750870..1752561 (-) | 1692 | WP_016787694.1 | type IV pilus secretin PilQ | Machinery gene |
| BCV31_RS07770 (BCV31_07770) | pilP | 1752621..1753139 (-) | 519 | WP_016787693.1 | pilus assembly protein PilP | Machinery gene |
| BCV31_RS07775 (BCV31_07775) | pilO | 1753126..1753755 (-) | 630 | WP_010435284.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| BCV31_RS07780 (BCV31_07780) | pilN | 1753748..1754362 (-) | 615 | WP_010435288.1 | PilN domain-containing protein | Machinery gene |
| BCV31_RS07785 (BCV31_07785) | pilM | 1754346..1755371 (-) | 1026 | WP_016787692.1 | type IV pilus assembly protein PilM | Machinery gene |
| BCV31_RS07790 (BCV31_07790) | - | 1755523..1758081 (+) | 2559 | WP_032547293.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 209 a.a. Molecular weight: 24324.99 Da Isoelectric Point: 4.9074
>NTDB_id=1054244 BCV31_RS07775 WP_010435284.1 1753126..1753755(-) (pilO) [Vibrio cyclitrophicus strain 10N.286.55.C10]
MANLQNRISWQNRMSLQDLDVDEITEWPLLPQLLVILLLMVLIQGLGTWLYILPLDDELQKMKQQEQTLKATLRIKANKV
AALPKLQSQLDELTSRYDYLLEQLPVQKELASMLASVNELGLDNKLTFTRIDWGQKQNKAFLYRLPLNIELTGDYHEIGD
FSAAIAKLPRIISFDDVNWQRVSQESSTLHFRVRAYTYQFKSEVNDETQ
MANLQNRISWQNRMSLQDLDVDEITEWPLLPQLLVILLLMVLIQGLGTWLYILPLDDELQKMKQQEQTLKATLRIKANKV
AALPKLQSQLDELTSRYDYLLEQLPVQKELASMLASVNELGLDNKLTFTRIDWGQKQNKAFLYRLPLNIELTGDYHEIGD
FSAAIAKLPRIISFDDVNWQRVSQESSTLHFRVRAYTYQFKSEVNDETQ
Nucleotide
Download Length: 630 bp
>NTDB_id=1054244 BCV31_RS07775 WP_010435284.1 1753126..1753755(-) (pilO) [Vibrio cyclitrophicus strain 10N.286.55.C10]
ATGGCTAACCTTCAAAATAGGATTAGTTGGCAAAATAGGATGAGCTTGCAAGATCTTGATGTTGATGAAATCACCGAATG
GCCGTTACTGCCTCAATTACTGGTGATTCTGTTGTTGATGGTGCTTATCCAAGGATTAGGGACTTGGCTCTATATTCTGC
CTTTGGACGATGAGCTACAGAAAATGAAACAACAAGAGCAAACCTTAAAAGCGACCTTGAGAATAAAGGCCAATAAGGTT
GCAGCCTTGCCTAAGTTGCAGAGTCAGTTAGATGAATTAACTAGCCGTTACGACTACTTGTTAGAGCAACTACCGGTTCA
AAAGGAGCTGGCCAGCATGTTGGCCTCAGTGAATGAACTTGGCTTGGATAACAAGCTGACGTTTACACGGATTGATTGGG
GGCAGAAGCAAAACAAAGCGTTTCTGTATCGGTTACCTCTCAATATCGAGTTGACGGGTGACTACCATGAGATTGGTGAT
TTCTCGGCGGCCATCGCTAAGCTGCCACGAATTATTAGCTTTGATGATGTGAACTGGCAGCGAGTCAGTCAAGAAAGTAG
CACGCTGCACTTTAGGGTTCGCGCTTATACCTACCAGTTTAAGTCGGAGGTGAATGATGAAACCCAGTAA
ATGGCTAACCTTCAAAATAGGATTAGTTGGCAAAATAGGATGAGCTTGCAAGATCTTGATGTTGATGAAATCACCGAATG
GCCGTTACTGCCTCAATTACTGGTGATTCTGTTGTTGATGGTGCTTATCCAAGGATTAGGGACTTGGCTCTATATTCTGC
CTTTGGACGATGAGCTACAGAAAATGAAACAACAAGAGCAAACCTTAAAAGCGACCTTGAGAATAAAGGCCAATAAGGTT
GCAGCCTTGCCTAAGTTGCAGAGTCAGTTAGATGAATTAACTAGCCGTTACGACTACTTGTTAGAGCAACTACCGGTTCA
AAAGGAGCTGGCCAGCATGTTGGCCTCAGTGAATGAACTTGGCTTGGATAACAAGCTGACGTTTACACGGATTGATTGGG
GGCAGAAGCAAAACAAAGCGTTTCTGTATCGGTTACCTCTCAATATCGAGTTGACGGGTGACTACCATGAGATTGGTGAT
TTCTCGGCGGCCATCGCTAAGCTGCCACGAATTATTAGCTTTGATGATGTGAACTGGCAGCGAGTCAGTCAAGAAAGTAG
CACGCTGCACTTTAGGGTTCGCGCTTATACCTACCAGTTTAAGTCGGAGGTGAATGATGAAACCCAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio cholerae strain A1552 |
76.684 |
92.344 |
0.708 |
| pilO | Vibrio campbellii strain DS40M4 |
74.054 |
88.517 |
0.656 |