Detailed information NTG1054246

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: BCV31_RS07785
• Genome accession: NZ_CP169999
• Coordinates: 1754346..1755371 (-)
• Length: 341 a.a.
• NCBI ID: WP_016787692.1
• Uniprot ID: A0AAN0LM26
• Organism: Vibrio cyclitrophicus strain 10N.286.55.C10
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1749346..1760371

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BCV31_RS07760 (BCV31_07760)	aroK	1750175..1750693 (-)	519	WP_009848907.1	shikimate kinase AroK	-
BCV31_RS07765 (BCV31_07765)	pilQ	1750870..1752561 (-)	1692	WP_016787694.1	type IV pilus secretin PilQ	Machinery gene
BCV31_RS07770 (BCV31_07770)	pilP	1752621..1753139 (-)	519	WP_016787693.1	pilus assembly protein PilP	Machinery gene
BCV31_RS07775 (BCV31_07775)	pilO	1753126..1753755 (-)	630	WP_010435284.1	type 4a pilus biogenesis protein PilO	Machinery gene
BCV31_RS07780 (BCV31_07780)	pilN	1753748..1754362 (-)	615	WP_010435288.1	PilN domain-containing protein	Machinery gene
BCV31_RS07785 (BCV31_07785)	pilM	1754346..1755371 (-)	1026	WP_016787692.1	type IV pilus assembly protein PilM	Machinery gene
BCV31_RS07790 (BCV31_07790)	-	1755523..1758081 (+)	2559	WP_032547293.1	penicillin-binding protein 1A	-
BCV31_RS07795 (BCV31_07795)	oxyR	1758177..1759070 (-)	894	WP_010435297.1	DNA-binding transcriptional regulator OxyR	-
BCV31_RS07800 (BCV31_07800)	-	1759292..1760020 (+)	729	WP_010435300.1	glutathione peroxidase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 38128.77 Da
• Isoelectric Point: 6.8348

>NTDB_id=1054246 BCV31_RS07785 WP_016787692.1 1754346..1755371(-) (pilM) [Vibrio cyclitrophicus strain 10N.286.55.C10]
MGSSLITGIDINHHSIKAVVLKPVGESYALVGYKELPISDDIFTANHTLEYQKTVKKLKELRKGLPFGSRNVAISVPDNT
VISKVLQIESELEDREKEFSIYQTFAHQSPFPIEELSLDFVKLEDKRFGKGSTSSYQVYATRKEVVDSRADALTKAGFKP
IVVDTQAHGLLNIWQLASHLYPEKKNWLLVDVGVDQTSLGIIPQGSAPFYKDIAFGIQDLCSTGNSMDMEGGFSNVEEKH
KFIVNLIEKLKRQLQLYSSVNALQPISGIWLMGEGASMPMVVEELERHFQLSCESLNPLSLFENKVAKKRRLPMDWQHFG
IAAGMAMSGLKWQGEKHVASN

Nucleotide

• Length: 1026 bp

>NTDB_id=1054246 BCV31_RS07785 WP_016787692.1 1754346..1755371(-) (pilM) [Vibrio cyclitrophicus strain 10N.286.55.C10]
ATGGGTTCATCATTAATTACAGGTATAGATATAAATCACCACAGCATCAAAGCCGTGGTACTAAAACCCGTTGGGGAGTC
GTATGCCCTGGTGGGATACAAAGAGCTGCCGATTTCGGACGACATTTTTACAGCTAACCATACTTTGGAGTATCAGAAAA
CTGTTAAGAAACTCAAAGAACTTAGGAAAGGGCTGCCTTTTGGAAGCCGCAACGTCGCTATTTCGGTACCGGATAACACG
GTGATCAGCAAAGTACTGCAAATAGAGAGCGAATTAGAAGATAGAGAAAAGGAGTTCTCGATCTATCAAACCTTTGCTCA
TCAATCTCCCTTTCCTATCGAGGAGCTGAGTTTAGATTTTGTAAAGCTAGAAGACAAACGATTTGGTAAAGGATCAACAA
GCAGCTATCAAGTGTATGCGACTCGTAAAGAGGTGGTTGATAGCCGAGCTGACGCGCTAACGAAAGCAGGGTTTAAGCCC
ATCGTTGTCGACACTCAGGCCCATGGTTTACTCAACATTTGGCAATTGGCTTCGCATTTGTATCCAGAAAAAAAGAATTG
GCTGTTGGTGGATGTTGGCGTTGATCAAACTTCATTAGGCATTATTCCCCAAGGTTCAGCGCCATTTTATAAAGATATTG
CCTTTGGCATTCAAGATCTTTGCAGTACGGGTAACTCGATGGATATGGAGGGTGGGTTTAGTAACGTTGAGGAGAAGCAT
AAGTTTATTGTCAATTTGATTGAAAAACTCAAGCGTCAGTTACAGCTCTATTCATCGGTCAATGCGCTTCAACCTATCTC
AGGAATTTGGCTAATGGGCGAAGGAGCAAGTATGCCGATGGTCGTTGAAGAGTTAGAGCGACATTTTCAGTTAAGTTGTG
AGTCTTTGAACCCCCTATCTTTGTTTGAGAATAAGGTCGCGAAAAAACGTCGATTACCCATGGATTGGCAACATTTTGGT
ATTGCAGCAGGCATGGCGATGAGTGGACTCAAGTGGCAGGGAGAAAAGCATGTTGCATCAAATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (8-220)

• Type IV pilus assembly protein PilM; (PilM_2) (242-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Vibrio cholerae strain A1552	53.392	99.413	0.531
pilM	Vibrio campbellii strain DS40M4	47.661	100	0.478