Detailed information NTG1053810

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: ABUS28_RS04405
• Genome accession: NZ_CP169866
• Coordinates: 907495..909927 (+)
• Length: 810 a.a.
• NCBI ID: WP_005138188.1
• Uniprot ID: N9KYA3
• Organism: Acinetobacter baumannii strain Rp779
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	906723..923348	907495..909927	within	0

Gene organization within MGE regions

Location: 906723..923348

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABUS28_RS04400	lolD	906723..907409 (+)	687	WP_005138187.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
ABUS28_RS04405	comA/comEC	907495..909927 (+)	2433	WP_005138188.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ABUS28_RS04410	-	909880..910863 (-)	984	WP_001984639.1	lysophospholipid acyltransferase family protein	-
ABUS28_RS04415	sppA	911000..912016 (+)	1017	WP_001286615.1	signal peptide peptidase SppA	-
ABUS28_RS04420	-	912035..912844 (+)	810	WP_000114074.1	alpha/beta fold hydrolase	-
ABUS28_RS04425	purN	912908..913537 (-)	630	WP_000975532.1	phosphoribosylglycinamide formyltransferase	-
ABUS28_RS04430	purM	913534..914604 (-)	1071	WP_000071984.1	phosphoribosylformylglycinamidine cyclo-ligase	-
ABUS28_RS04435	cxpE	914740..915933 (+)	1194	WP_021511077.1	chloramphenicol efflux transporter CxpE	-
ABUS28_RS04440	hda	915954..916652 (+)	699	WP_001249535.1	DnaA regulatory inactivator Hda	-
ABUS28_RS04445	-	916970..917107 (+)	138	Protein_849	CSLREA domain-containing protein	-
ABUS28_RS04450	-	917155..918087 (-)	933	WP_016653379.1	IS5-like element ISAba13 family transposase	-
ABUS28_RS04455	rbtA	918144..919871 (+)	1728	Protein_851	rhombotarget A	-
ABUS28_RS04460	-	919950..920882 (+)	933	WP_001040037.1	IS5-like element ISAha2 family transposase	-
ABUS28_RS04465	-	920934..922559 (+)	1626	Protein_853	CSLREA domain-containing protein	-
ABUS28_RS04470	-	922649..923038 (-)	390	WP_000225919.1	DUF3106 domain-containing protein	-
ABUS28_RS04475	-	923028..923348 (-)	321	WP_001015075.1	hypothetical protein	-

Sequence

Protein

• Length: 810 a.a.
• Molecular weight: 92423.70 Da
• Isoelectric Point: 8.7336

>NTDB_id=1053810 ABUS28_RS04405 WP_005138188.1 907495..909927(+) (comA/comEC) [Acinetobacter baumannii strain Rp779]
MFKIILLGWIGGIALMGIDFPLIMQYEKVGEALLLLAFIFYLYKRPMFVDRPFLKAVFCLLGTTSLFMVGYHYAEKALIE
RLEQRETDTRNLNIIVYINRLSEEKDNKVQQTAQVLNLSKEPVNWLLYLKSNNQNLLKNNQNLELGHYYRISGKTRPAHS
YATPGAFDQEKWFIQRNIMSGFNVRYIEPLSLDEIYRLGYQQHLKEQQSFSNSFRLNIEKLRLTFRQILNSSSLQQKGLI
LALLTGDESLLSDETQLQFKQLGISHLLAISGPHVLIFAIMLSWACHQFISRYYPQIYLWKPKQVLMAVPCCLGVLIYTA
FVGFEIPALRTFLSVLIFIGFLLLKQPIKPFTLLVYSASLLLLMDPFSVFSAGFWLSYGACFILLRIYQTIAQLPEQHFL
SLSSKMIFMSKVLIESQGKIFIALSPLTLLFFQQISWVAPLTNIIAVPIVGSVIVPLNIMAACAWFVIKPFGNMLFHFND
MLLSILLSCLGLLEKLSLTLQGISLTPLSLLAISCAIIILFLPKGILPKTWGILCCLPLVIMNKTSQQIQLNILDVGQGQ
AIFLQHSEQNWLIDTGGSYDEKIFSIGQNVVVPFLRQQGVRQLDHVVLSHLDQDHSGAFPLIQQEIPVKQLISNEQLPND
LKQPFPYCHQGQQWHYPELDIQILWPKEKDLAFVASNQNQYSCVVYLQFKKVGGYQNFLIMGDAGWEAEYELLKDYPNLK
IDVLVLGHHGSKHSSAYDFLATLKPKLAIASAGFDNRYGHPSQQVIARLKALHIPLKSTVEQGTLSFVLENHKIVLHDRR
LDRLWLSRGF

Nucleotide

• Length: 2433 bp

>NTDB_id=1053810 ABUS28_RS04405 WP_005138188.1 907495..909927(+) (comA/comEC) [Acinetobacter baumannii strain Rp779]
ATGTTTAAGATTATTCTATTGGGGTGGATTGGCGGTATTGCATTGATGGGAATAGATTTCCCTTTAATCATGCAATATGA
AAAAGTGGGCGAGGCTCTACTGTTACTTGCCTTTATTTTTTATCTTTATAAACGACCAATGTTCGTTGATCGACCATTTT
TAAAGGCAGTGTTTTGCTTATTAGGTACAACAAGTCTTTTTATGGTTGGTTACCACTATGCTGAAAAAGCACTGATTGAA
CGATTAGAACAAAGAGAAACGGATACCCGAAATCTCAACATTATTGTCTATATAAACCGTTTAAGTGAAGAAAAAGATAA
TAAGGTTCAACAAACTGCACAAGTTCTAAATCTTTCTAAAGAACCGGTGAATTGGTTGCTATATTTAAAAAGTAATAATC
AAAATTTATTAAAGAATAATCAGAATCTTGAATTAGGTCACTATTATCGAATATCTGGAAAAACAAGACCTGCGCATAGT
TATGCCACCCCAGGAGCTTTTGATCAGGAAAAGTGGTTTATTCAGCGAAATATTATGTCTGGTTTTAACGTGAGATATAT
TGAGCCTTTAAGTCTCGATGAAATCTATCGATTGGGCTATCAGCAACATTTAAAAGAACAACAGTCTTTTTCCAATAGTT
TTCGTTTAAATATAGAAAAACTTCGCTTAACTTTTAGGCAAATATTAAACAGCTCATCTCTACAGCAAAAGGGTTTAATT
TTAGCTTTGCTGACAGGTGATGAAAGCCTTTTATCAGATGAAACTCAACTACAGTTCAAACAATTAGGAATTAGTCATTT
ATTGGCGATCTCAGGCCCACATGTGCTCATTTTTGCCATTATGTTATCTTGGGCATGTCATCAATTTATTAGTCGTTATT
ATCCTCAAATTTATTTATGGAAACCGAAACAGGTTTTGATGGCTGTACCATGCTGCCTTGGCGTTCTAATTTATACTGCA
TTTGTAGGTTTCGAAATTCCTGCACTACGAACATTCCTATCAGTCCTTATATTTATTGGTTTTCTATTATTAAAACAACC
TATTAAACCTTTTACATTACTCGTATATAGCGCAAGTCTACTGTTGCTAATGGACCCGTTTAGTGTGTTTTCTGCAGGTT
TTTGGCTGTCTTATGGGGCATGCTTTATTTTATTAAGAATTTACCAAACTATAGCGCAGCTACCTGAGCAACATTTTTTG
AGTCTGAGTTCAAAAATGATTTTTATGAGTAAGGTATTAATTGAATCTCAAGGCAAAATATTTATTGCATTGAGCCCTTT
AACCTTACTTTTCTTTCAACAAATTTCTTGGGTTGCTCCATTAACCAATATTATTGCCGTGCCTATTGTTGGTAGTGTTA
TTGTCCCTTTAAACATCATGGCTGCTTGCGCATGGTTTGTAATAAAACCATTTGGAAATATGCTTTTTCATTTCAATGAT
ATGTTGCTCAGCATATTACTGAGTTGTTTGGGCTTATTAGAAAAACTCTCTTTAACATTACAAGGTATAAGCTTGACGCC
ACTGTCTTTATTAGCGATTAGTTGTGCCATTATTATTTTATTTTTACCTAAAGGAATTCTGCCCAAAACTTGGGGAATAT
TATGTTGTTTACCCTTAGTTATTATGAACAAAACGAGTCAGCAAATTCAGCTTAATATTTTAGATGTTGGACAGGGGCAA
GCCATTTTTTTACAACATTCCGAACAAAACTGGTTAATTGATACAGGCGGTTCTTACGATGAAAAAATATTTAGTATTGG
ACAAAATGTTGTAGTGCCTTTTCTACGTCAGCAAGGCGTAAGACAATTAGATCATGTTGTGCTATCCCATCTTGATCAAG
ACCATAGTGGCGCGTTTCCTCTTATTCAACAAGAGATTCCTGTAAAGCAGCTTATTTCGAATGAACAATTACCAAATGAT
TTAAAGCAACCATTCCCATATTGCCATCAAGGGCAACAATGGCATTATCCTGAGTTAGATATTCAAATTTTATGGCCTAA
AGAAAAAGATCTGGCTTTTGTTGCTTCTAACCAGAATCAATATTCTTGTGTTGTATATCTTCAATTTAAAAAAGTTGGTG
GTTACCAAAATTTTCTTATTATGGGCGATGCTGGATGGGAAGCTGAATACGAGTTATTAAAAGATTATCCTAACTTGAAG
ATAGATGTGTTAGTGCTAGGGCATCATGGAAGTAAGCACAGTTCGGCTTATGATTTCTTGGCGACCTTAAAACCTAAACT
GGCCATTGCATCGGCAGGGTTTGATAACCGTTATGGCCATCCTAGCCAACAAGTTATAGCACGTTTAAAAGCTCTACATA
TTCCGCTAAAAAGCACTGTGGAACAAGGGACCTTAAGTTTTGTGTTGGAAAATCACAAAATAGTTTTACATGACCGACGT
TTGGATAGGCTCTGGTTGAGTAGAGGTTTTTAA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (33-188)

• Metallo-beta-lactamase superfamily (Lactamase_B) (555-638)

• Competence protein (Competence) (243-522)

3D structure

• AlphaFold DB: N9KYA3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baumannii D1279779	99.012	100	0.99
comA/comEC	Acinetobacter baumannii strain A118	97.16	100	0.972
comA/comEC	Acinetobacter baylyi ADP1	50.062	100	0.501