Detailed information NTG1053514

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: ABUS16_RS01430
• Genome accession: NZ_CP169833
• Coordinates: 280426..280908 (-)
• Length: 160 a.a.
• NCBI ID: WP_001046489.1
• Uniprot ID: A0A0J0ZLV7
• Organism: Acinetobacter baumannii strain Rp376
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 275426..285908

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABUS16_RS01395	-	275537..276568 (+)	1032	WP_001189459.1	lipase secretion chaperone	-
ABUS16_RS01400	-	276683..277624 (+)	942	WP_085916958.1	triacylglycerol lipase	-
ABUS16_RS01405	rplS	277676..278044 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
ABUS16_RS01410	trmD	278252..278992 (-)	741	WP_000464595.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
ABUS16_RS01415	rimM	279038..279586 (-)	549	WP_000189236.1	ribosome maturation factor RimM	-
ABUS16_RS01420	rpsP	279606..279857 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
ABUS16_RS01425	pilE	280004..280429 (-)	426	WP_000788336.1	type IV pilin protein	Machinery gene
ABUS16_RS01430	pilY2	280426..280908 (-)	483	WP_001046489.1	type IV pilin protein	Machinery gene
ABUS16_RS01435	pilY1	280919..284773 (-)	3855	WP_000768943.1	VWA domain-containing protein	Machinery gene
ABUS16_RS01440	pilX	284785..285603 (-)	819	WP_000149374.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17657.94 Da
• Isoelectric Point: 8.4737

>NTDB_id=1053514 ABUS16_RS01430 WP_001046489.1 280426..280908(-) (pilY2) [Acinetobacter baumannii strain Rp376]
MNKYYILRFNQGFTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCETNSEVWQ

Nucleotide

• Length: 483 bp

>NTDB_id=1053514 ABUS16_RS01430 WP_001046489.1 280426..280908(-) (pilY2) [Acinetobacter baumannii strain Rp376]
ATGAATAAGTACTACATTTTACGGTTCAATCAGGGTTTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAACGAACAGTGAGGTTTGGCAG
TGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-115)

3D structure

• AlphaFold DB: A0A0J0ZLV7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	96.25	100	0.963
comE	Acinetobacter baylyi ADP1	41.86	100	0.45