Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   ABUS46_RS15885 Genome accession   NZ_CP169798
Coordinates   3293300..3293710 (-) Length   136 a.a.
NCBI ID   WP_031959727.1    Uniprot ID   A0AAD2YQC0
Organism   Acinetobacter baumannii strain Hv781     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3288300..3298710
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABUS46_RS15855 - 3288386..3288655 (-) 270 WP_000567533.1 HPr family phosphocarrier protein -
  ABUS46_RS15860 rapZ 3288652..3289503 (-) 852 WP_000821671.1 RNase adapter RapZ -
  ABUS46_RS15865 panC 3289526..3290374 (-) 849 WP_000846362.1 pantoate--beta-alanine ligase -
  ABUS46_RS15870 panB 3290378..3291187 (-) 810 WP_000624763.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  ABUS46_RS15875 folK 3291233..3291715 (-) 483 WP_000219213.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  ABUS46_RS15880 pcnB 3291712..3293175 (-) 1464 WP_031959729.1 polynucleotide adenylyltransferase PcnB -
  ABUS46_RS15885 comEA 3293300..3293710 (-) 411 WP_031959727.1 ComEA family DNA-binding protein Machinery gene
  ABUS46_RS15890 mazG 3293679..3294485 (-) 807 WP_031959726.1 nucleoside triphosphate pyrophosphohydrolase -
  ABUS46_RS15895 - 3294597..3295370 (+) 774 WP_024433150.1 SDR family oxidoreductase -
  ABUS46_RS15900 - 3295415..3297721 (-) 2307 WP_000259109.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 15761.12 Da        Isoelectric Point: 10.4475

>NTDB_id=1053166 ABUS46_RS15885 WP_031959727.1 3293300..3293710(-) (comEA) [Acinetobacter baumannii strain Hv781]
MQYSMRFWKNKYFLLIMLCLGVISPSIYAQSFDKNFQEWKAKQQMYDQKLNISKFSHSNGSKISQTKNFNDSTGQIHLNQ
ANVNEFQQLKGIGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL

Nucleotide


Download         Length: 411 bp        

>NTDB_id=1053166 ABUS46_RS15885 WP_031959727.1 3293300..3293710(-) (comEA) [Acinetobacter baumannii strain Hv781]
ATGCAATACAGCATGAGATTTTGGAAAAATAAGTATTTTCTTTTAATAATGTTGTGCTTGGGGGTAATTTCACCTTCGAT
TTACGCTCAATCTTTTGACAAAAACTTTCAAGAATGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAACATCTCTA
AGTTTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTCTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGAGTTTCAGCAGTTAAAAGGTATAGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACAGACAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCCATTTTTGAAAAAAATAAATCACGTT
TAGCCTTATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(74-134)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

95.588

100

0.956
  comEA Acinetobacter baumannii D1279779

94.853

100

0.949
  comEA Acinetobacter baylyi ADP1

42.748

96.324

0.412

Multiple sequence alignment