Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | ABUS40_RS17085 | Genome accession | NZ_CP169788 |
| Coordinates | 3573975..3574457 (-) | Length | 160 a.a. |
| NCBI ID | WP_001046489.1 | Uniprot ID | A0A0J0ZLV7 |
| Organism | Acinetobacter baumannii strain Hv766 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3568975..3579457
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABUS40_RS17050 | - | 3569086..3570117 (+) | 1032 | WP_001189459.1 | lipase secretion chaperone | - |
| ABUS40_RS17055 | - | 3570232..3571173 (+) | 942 | WP_085916958.1 | triacylglycerol lipase | - |
| ABUS40_RS17060 | rplS | 3571225..3571593 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| ABUS40_RS17065 | trmD | 3571801..3572541 (-) | 741 | WP_000464595.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ABUS40_RS17070 | rimM | 3572587..3573135 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| ABUS40_RS17075 | rpsP | 3573155..3573406 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ABUS40_RS17080 | pilE | 3573553..3573978 (-) | 426 | WP_000788336.1 | type IV pilin protein | Machinery gene |
| ABUS40_RS17085 | pilY2 | 3573975..3574457 (-) | 483 | WP_001046489.1 | type IV pilin protein | Machinery gene |
| ABUS40_RS17090 | pilY1 | 3574468..3578322 (-) | 3855 | WP_000768943.1 | VWA domain-containing protein | Machinery gene |
| ABUS40_RS17095 | pilX | 3578334..3579152 (-) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17657.94 Da Isoelectric Point: 8.4737
>NTDB_id=1053043 ABUS40_RS17085 WP_001046489.1 3573975..3574457(-) (pilY2) [Acinetobacter baumannii strain Hv766]
MNKYYILRFNQGFTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCETNSEVWQ
MNKYYILRFNQGFTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCETNSEVWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=1053043 ABUS40_RS17085 WP_001046489.1 3573975..3574457(-) (pilY2) [Acinetobacter baumannii strain Hv766]
ATGAATAAGTACTACATTTTACGGTTCAATCAGGGTTTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAACGAACAGTGAGGTTTGGCAG
TGA
ATGAATAAGTACTACATTTTACGGTTCAATCAGGGTTTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAACGAACAGTGAGGTTTGGCAG
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
96.25 |
100 |
0.963 |
| comE | Acinetobacter baylyi ADP1 |
41.86 |
100 |
0.45 |