Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   ABUS31_RS02520 Genome accession   NZ_CP169785
Coordinates   529271..529681 (+) Length   136 a.a.
NCBI ID   WP_002017231.1    Uniprot ID   N9KEH5
Organism   Acinetobacter baumannii strain Hv652     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 524271..534681
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABUS31_RS02505 - 525260..527566 (+) 2307 WP_000259109.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -
  ABUS31_RS02510 - 527611..528384 (-) 774 WP_000682841.1 SDR family oxidoreductase -
  ABUS31_RS02515 mazG 528496..529302 (+) 807 WP_000359483.1 nucleoside triphosphate pyrophosphohydrolase -
  ABUS31_RS02520 comEA 529271..529681 (+) 411 WP_002017231.1 ComEA family DNA-binding protein Machinery gene
  ABUS31_RS02525 pcnB 529806..531269 (+) 1464 WP_001194207.1 polynucleotide adenylyltransferase PcnB -
  ABUS31_RS02530 folK 531266..531748 (+) 483 WP_000219213.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  ABUS31_RS02535 panB 531794..532603 (+) 810 WP_000624763.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  ABUS31_RS02540 panC 532607..533455 (+) 849 WP_000846362.1 pantoate--beta-alanine ligase -
  ABUS31_RS02545 rapZ 533478..534329 (+) 852 WP_000821671.1 RNase adapter RapZ -
  ABUS31_RS02550 - 534326..534595 (+) 270 WP_000567533.1 HPr family phosphocarrier protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 15654.89 Da        Isoelectric Point: 10.3828

>NTDB_id=1052976 ABUS31_RS02520 WP_002017231.1 529271..529681(+) (comEA) [Acinetobacter baumannii strain Hv652]
MQYSMRFWKNKYFVLIILCLGVISPSVYAQSFDQNFQEWKAKQQMYDQKLNITKSSHSNGSKISQTKNFNDSTGQIHLNQ
ANVNEFQQLKGVGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL

Nucleotide


Download         Length: 411 bp        

>NTDB_id=1052976 ABUS31_RS02520 WP_002017231.1 529271..529681(+) (comEA) [Acinetobacter baumannii strain Hv652]
ATGCAATACAGCATGAGATTTTGGAAAAATAAGTATTTTGTTTTAATAATTTTGTGCTTGGGAGTAATTTCACCTTCGGT
TTACGCTCAATCTTTTGATCAAAACTTTCAAGAATGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAACATCACTA
AGTCTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTCTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGAGTTTCAGCAATTAAAAGGTGTAGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACAGACAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCTATTTTTGAAAAAAATAAATCGCGTT
TAGCCTTATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(74-134)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9KEH5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

97.794

100

0.978
  comEA Acinetobacter baumannii D1279779

95.588

100

0.956
  comEA Acinetobacter baylyi ADP1

42.748

96.324

0.412

Multiple sequence alignment