Detailed information
Bioinformatically predicted
Overview
| Name | ctsP | Type | Machinery gene |
| Locus tag | R8665_RS07740 | Genome accession | NZ_AP028386 |
| Coordinates | 1493423..1494031 (-) | Length | 202 a.a. |
| NCBI ID | WP_002899084.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain BCH-11348 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1488423..1499031
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8665_RS07715 (B11348_15130) | - | 1488580..1489344 (+) | 765 | WP_317676926.1 | TIGR02757 family protein | - |
| R8665_RS07720 (B11348_15140) | - | 1489348..1490112 (+) | 765 | WP_061210475.1 | TSUP family transporter | - |
| R8665_RS07725 (B11348_15150) | ctsF | 1490105..1491286 (-) | 1182 | WP_317676929.1 | type II secretion system F family protein | Machinery gene |
| R8665_RS07730 (B11348_15160) | ctsE | 1491283..1492842 (-) | 1560 | WP_032595054.1 | GspE/PulE family protein | Machinery gene |
| R8665_RS07735 (B11348_15170) | ctsX | 1492832..1493419 (-) | 588 | WP_002899082.1 | hypothetical protein | Machinery gene |
| R8665_RS07740 (B11348_15180) | ctsP | 1493423..1494031 (-) | 609 | WP_002899084.1 | ATP-binding protein | Machinery gene |
| R8665_RS07745 (B11348_15190) | ctsD | 1494024..1495436 (-) | 1413 | WP_002862130.1 | pilus (MSHA type) biogenesis protein MshL | Machinery gene |
| R8665_RS07750 (B11348_15200) | ctsR | 1495414..1495725 (-) | 312 | WP_002862131.1 | hypothetical protein | Machinery gene |
Sequence
Protein
Download Length: 202 a.a. Molecular weight: 23773.75 Da Isoelectric Point: 9.8159
>NTDB_id=105263 R8665_RS07740 WP_002899084.1 1493423..1494031(-) (ctsP) [Campylobacter jejuni strain BCH-11348]
MSKIIPFREEIFHQINQILESQKAFIFLWGKSGSGKSVLLQRLAKKYNVDFINENFKDQSFLKEKIEFLISQSQSLIILD
EVGMYDYAMLESIRIYSDSISFVLSSHKKLNILKKEHFKSRLSACFELKNISLLELDDYIKLKFGMNFSNKCLKFLQKIS
QGNLRYIDKTLKSFYEINSFFDKNKSQEYILKLSALENGLLR
MSKIIPFREEIFHQINQILESQKAFIFLWGKSGSGKSVLLQRLAKKYNVDFINENFKDQSFLKEKIEFLISQSQSLIILD
EVGMYDYAMLESIRIYSDSISFVLSSHKKLNILKKEHFKSRLSACFELKNISLLELDDYIKLKFGMNFSNKCLKFLQKIS
QGNLRYIDKTLKSFYEINSFFDKNKSQEYILKLSALENGLLR
Nucleotide
Download Length: 609 bp
>NTDB_id=105263 R8665_RS07740 WP_002899084.1 1493423..1494031(-) (ctsP) [Campylobacter jejuni strain BCH-11348]
ATGAGTAAAATTATTCCATTTAGAGAAGAAATTTTTCATCAAATCAATCAAATTTTAGAAAGCCAAAAAGCTTTTATTTT
TTTATGGGGAAAAAGTGGTAGCGGTAAAAGTGTATTGTTGCAAAGATTGGCAAAAAAATATAATGTTGATTTTATTAATG
AAAATTTTAAAGATCAGAGTTTCTTAAAAGAAAAAATTGAGTTTTTGATTTCACAAAGTCAGAGTTTAATCATTCTTGAT
GAAGTAGGAATGTATGATTATGCAATGCTAGAAAGCATTAGGATTTATAGTGATTCTATAAGTTTTGTTTTAAGTTCTCA
TAAAAAGTTAAATATACTTAAAAAAGAGCATTTTAAAAGTCGTTTAAGTGCTTGTTTTGAATTGAAAAATATTAGTCTTT
TAGAGCTTGATGATTATATTAAATTGAAATTCGGAATGAATTTTTCAAATAAATGTCTTAAGTTTTTACAAAAAATTTCT
CAAGGAAATTTAAGATATATTGATAAAACTTTAAAAAGTTTTTATGAGATAAATAGTTTTTTTGATAAAAATAAAAGTCA
AGAGTATATTTTAAAGCTTAGTGCTTTAGAGAATGGCTTATTAAGGTAA
ATGAGTAAAATTATTCCATTTAGAGAAGAAATTTTTCATCAAATCAATCAAATTTTAGAAAGCCAAAAAGCTTTTATTTT
TTTATGGGGAAAAAGTGGTAGCGGTAAAAGTGTATTGTTGCAAAGATTGGCAAAAAAATATAATGTTGATTTTATTAATG
AAAATTTTAAAGATCAGAGTTTCTTAAAAGAAAAAATTGAGTTTTTGATTTCACAAAGTCAGAGTTTAATCATTCTTGAT
GAAGTAGGAATGTATGATTATGCAATGCTAGAAAGCATTAGGATTTATAGTGATTCTATAAGTTTTGTTTTAAGTTCTCA
TAAAAAGTTAAATATACTTAAAAAAGAGCATTTTAAAAGTCGTTTAAGTGCTTGTTTTGAATTGAAAAATATTAGTCTTT
TAGAGCTTGATGATTATATTAAATTGAAATTCGGAATGAATTTTTCAAATAAATGTCTTAAGTTTTTACAAAAAATTTCT
CAAGGAAATTTAAGATATATTGATAAAACTTTAAAAAGTTTTTATGAGATAAATAGTTTTTTTGATAAAAATAAAAGTCA
AGAGTATATTTTAAAGCTTAGTGCTTTAGAGAATGGCTTATTAAGGTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsP | Campylobacter jejuni subsp. jejuni 81-176 |
98.515 |
100 |
0.985 |