Detailed information NTG1052323

Bioinformatically predicted

Overview

• Name: comGD
• Type: Machinery gene
• Locus tag: ACEPM6_RS08750
• Genome accession: NZ_CP169570
• Coordinates: 1780721..1781158 (-)
• Length: 145 a.a.
• NCBI ID: WP_007612572.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain CIMT3
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1775721..1786158

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACEPM6_RS08700 (ACEPM6_08700)	sinI	1776104..1776277 (+)	174	WP_014418369.1	anti-repressor SinI	Regulator
ACEPM6_RS08705 (ACEPM6_08705)	sinR	1776311..1776646 (+)	336	WP_003153104.1	transcriptional regulator SinR	Regulator
ACEPM6_RS08710 (ACEPM6_08710)	tasA	1776694..1777479 (-)	786	WP_007408329.1	biofilm matrix protein TasA	-
ACEPM6_RS08715 (ACEPM6_08715)	sipW	1777544..1778128 (-)	585	WP_022552967.1	signal peptidase I SipW	-
ACEPM6_RS08720 (ACEPM6_08720)	tapA	1778100..1778771 (-)	672	WP_014418371.1	amyloid fiber anchoring/assembly protein TapA	-
ACEPM6_RS08725 (ACEPM6_08725)	-	1779030..1779359 (+)	330	WP_012117979.1	DUF3889 domain-containing protein	-
ACEPM6_RS08730 (ACEPM6_08730)	-	1779400..1779579 (-)	180	WP_022552966.1	YqzE family protein	-
ACEPM6_RS08735 (ACEPM6_08735)	comGG	1779636..1780013 (-)	378	WP_022552965.1	competence type IV pilus minor pilin ComGG	Machinery gene
ACEPM6_RS08740 (ACEPM6_08740)	comGF	1780014..1780409 (-)	396	WP_046559876.1	competence type IV pilus minor pilin ComGF	-
ACEPM6_RS08745 (ACEPM6_08745)	comGE	1780423..1780737 (-)	315	WP_021494312.1	competence type IV pilus minor pilin ComGE	Machinery gene
ACEPM6_RS08750 (ACEPM6_08750)	comGD	1780721..1781158 (-)	438	WP_007612572.1	competence type IV pilus minor pilin ComGD	Machinery gene
ACEPM6_RS08755 (ACEPM6_08755)	comGC	1781148..1781456 (-)	309	WP_014418376.1	competence type IV pilus major pilin ComGC	Machinery gene
ACEPM6_RS08760 (ACEPM6_08760)	comGB	1781461..1782498 (-)	1038	WP_022552962.1	competence type IV pilus assembly protein ComGB	Machinery gene
ACEPM6_RS08765 (ACEPM6_08765)	comGA	1782485..1783555 (-)	1071	WP_014418378.1	competence type IV pilus ATPase ComGA	Machinery gene
ACEPM6_RS08770 (ACEPM6_08770)	-	1783748..1784698 (-)	951	WP_014418379.1	magnesium transporter CorA family protein	-
ACEPM6_RS08775 (ACEPM6_08775)	-	1784844..1786145 (+)	1302	WP_022552961.1	hemolysin family protein	-

Sequence

Protein

• Length: 145 a.a.
• Molecular weight: 16254.76 Da
• Isoelectric Point: 10.1850

>NTDB_id=1052323 ACEPM6_RS08750 WP_007612572.1 1780721..1781158(-) (comGD) [Bacillus velezensis strain CIMT3]
MNNNRRTENGFTLLESLIVLSLASVLLTVLFTTVPPVCTHLAVRQKTEQLQKDIQLAQETAIAEHKRTKITFLPKEHKYK
LQSGGRIVERSFDSLHITLVTLPESLEFNEKGHPNSGGKIQLKSAGFTYEITVYLGSGNVHAKRK

Nucleotide

• Length: 438 bp

>NTDB_id=1052323 ACEPM6_RS08750 WP_007612572.1 1780721..1781158(-) (comGD) [Bacillus velezensis strain CIMT3]
TTGAACAATAACAGGCGGACAGAAAATGGGTTTACCCTACTTGAAAGCCTGATTGTGTTAAGCCTGGCGTCCGTCCTGCT
GACGGTTTTGTTCACGACGGTTCCGCCGGTCTGCACCCACCTTGCCGTGCGGCAAAAAACAGAACAGCTCCAAAAAGATA
TTCAGCTTGCTCAGGAAACGGCTATCGCAGAACATAAAAGAACAAAAATCACTTTTCTTCCAAAAGAGCATAAATACAAA
CTGCAGTCAGGCGGAAGGATTGTCGAGCGTTCTTTTGATTCGCTTCACATTACGCTTGTGACTTTACCGGAGAGCCTTGA
ATTTAACGAAAAAGGCCATCCGAATTCGGGAGGAAAGATTCAATTGAAGAGCGCCGGGTTCACCTATGAGATAACAGTTT
ACTTAGGGAGCGGAAATGTCCATGCTAAACGGAAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (5-31)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD	Bacillus subtilis subsp. subtilis str. 168	55.479	100	0.559